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LOC122664019 homocysteine S-methyltransferase 1 [ Telopea speciosissima ]

Gene ID: 122664019, updated on 30-Nov-2023

Summary

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Gene symbol
LOC122664019
Gene description
homocysteine S-methyltransferase 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Telopea speciosissima
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Proteales; Proteaceae; Telopea
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Genomic context

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See LOC122664019 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
12
Annotation release Status Assembly Chr Location
100 current Tspe_v1 (GCF_018873765.1) 6 NC_057921.1 (41768619..41796540)

Chromosome 6 - NC_057921.1Genomic Context describing neighboring genes Neighboring gene uncharacterized mitochondrial protein AtMg00810-like Neighboring gene cytokinin hydroxylase-like Neighboring gene zinc finger protein CONSTANS-LIKE 16-like Neighboring gene RNA-binding KH domain-containing protein RCF3-like Neighboring gene putative threonine aspartase Neighboring gene uncharacterized LOC122666119

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_057921.1 Chromosome 6 Reference Tspe_v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables S-adenosylmethionine-homocysteine S-methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in S-methylmethionine cycle IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in methionine biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
homocysteine S-methyltransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Telopea speciosissima Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Tspe_v1

Genomic

  1. NC_057921.1 Reference Tspe_v1

    Range
    41768619..41796540
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_043859697.1 → XP_043715632.1  homocysteine S-methyltransferase 1

    Conserved Domains (1) summary
    PLN02489
    Location:10 → 332
    PLN02489; homocysteine S-methyltransferase

  2. XM_043859699.1 → XP_043715634.1  homocysteine S-methyltransferase 1

    Conserved Domains (1) summary
    PLN02489
    Location:10 → 332
    PLN02489; homocysteine S-methyltransferase

  3. XM_043859700.1 → XP_043715635.1  homocysteine S-methyltransferase 1

    Conserved Domains (1) summary
    PLN02489
    Location:10 → 332
    PLN02489; homocysteine S-methyltransferase
Nucleotide Protein
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