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LOC122658508 probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC [ Telopea speciosissima ]

Gene ID: 122658508, updated on 30-Nov-2023

Summary

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Gene symbol
LOC122658508
Gene description
probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC
Gene type
protein coding
RefSeq status
MODEL
Organism
Telopea speciosissima
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Proteales; Proteaceae; Telopea
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Genomic context

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See LOC122658508 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
29
Annotation release Status Assembly Chr Location
100 current Tspe_v1 (GCF_018873765.1) 4 NC_057919.1 (54071308..54090257, complement)

Chromosome 4 - NC_057919.1Genomic Context describing neighboring genes Neighboring gene probable xyloglucan glycosyltransferase 6 Neighboring gene cysteine proteinase inhibitor 4-like Neighboring gene monooxygenase 1-like Neighboring gene uncharacterized LOC122659417

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_057919.1 Chromosome 4 Reference Tspe_v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein N-acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein O-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Telopea speciosissima Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Tspe_v1

Genomic

  1. NC_057919.1 Reference Tspe_v1

    Range
    54071308..54090257 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_043853501.1 → XP_043709436.1  probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC

    Conserved Domains (3) summary
    COG3914
    Location:364 → 969
    Spy; Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones]
    TIGR02917
    Location:73 → 501
    PEP_TPR_lipo; putative PEP-CTERM system TPR-repeat lipoprotein
    sd00006
    Location:237 → 265
    TPR; TPR repeat [structural motif]
Nucleotide Protein
Heading Accession and Version

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