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LOC122656864 alpha-(1,4)-fucosyltransferase-like [ Telopea speciosissima ]

Gene ID: 122656864, updated on 30-Nov-2023

Summary

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Gene symbol
LOC122656864
Gene description
alpha-(1,4)-fucosyltransferase-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Telopea speciosissima
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Proteales; Proteaceae; Telopea
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Genomic context

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See LOC122656864 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
4
Annotation release Status Assembly Chr Location
100 current Tspe_v1 (GCF_018873765.1) 3 NC_057918.1 (22886439..22912280, complement)

Chromosome 3 - NC_057918.1Genomic Context describing neighboring genes Neighboring gene serine carboxypeptidase-like 45 Neighboring gene uncharacterized LOC122656863 Neighboring gene aquaporin PIP2-4-like Neighboring gene protein LAX PANICLE 2-like Neighboring gene F-box/kelch-repeat protein At5g15710-like Neighboring gene PI-PLC X-box domain-containing protein DDB_G0293730-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_057918.1 Chromosome 3 Reference Tspe_v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-(1->3)-fucosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fucosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-(1,4)-fucosyltransferase-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Telopea speciosissima Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Tspe_v1

Genomic

  1. NC_057918.1 Reference Tspe_v1

    Range
    22886439..22912280 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_043851546.1 → XP_043707481.1  alpha-(1,4)-fucosyltransferase-like

Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases