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LOC122647080 cytochrome c oxidase subunit 2-like [ Telopea speciosissima ]

Gene ID: 122647080, updated on 30-Nov-2023

Summary

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Gene symbol
LOC122647080
Gene description
cytochrome c oxidase subunit 2-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Telopea speciosissima
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Proteales; Proteaceae; Telopea
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Genomic context

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See LOC122647080 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
100 current Tspe_v1 (GCF_018873765.1) Unplaced Scaffold NW_025317348.1 (211827..216618)

NW_025317348.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC122647109 Neighboring gene uncharacterized LOC122647079 Neighboring gene ribosomal protein S7, mitochondrial Neighboring gene NADH-ubiquinone oxidoreductase chain 6-like Neighboring gene uncharacterized LOC122647104 Neighboring gene probable cytochrome c biosynthesis protein Neighboring gene probable cytochrome c biosynthesis protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_025317348 Unplaced Scaffold Reference Tspe_v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables copper ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables cytochrome-c oxidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in ATP synthesis coupled electron transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: cytochrome c oxidase subunit 2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Telopea speciosissima Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Tspe_v1

Genomic

  1. NW_025317348.1 Reference Tspe_v1

    Range
    211827..216618
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_043840595.1 → XP_043696530.1  LOW QUALITY PROTEIN: cytochrome c oxidase subunit 2-like

    Conserved Domains (1) summary
    MTH00023
    Location:55 → 291
    COX2; cytochrome c oxidase subunit II; Validated
Nucleotide Protein
Heading Accession and Version

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