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LOC122637298 beta-1,3-galactosyltransferase 1-like [ Vespula pensylvanica (western yellowjacket) ]

Gene ID: 122637298, updated on 1-Oct-2024

Summary

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Gene symbol
LOC122637298
Gene description
beta-1,3-galactosyltransferase 1-like
Locus tag
H0235_001852
Gene type
protein coding
RefSeq status
MODEL
Organism
Vespula pensylvanica
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Vespoidea; Vespidae; Vespinae; Vespula
Orthologs
honey bee all
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Genomic context

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See LOC122637298 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
5
Annotation release Status Assembly Chr Location
100 current ASM1446617v1 (GCF_014466175.1) 1 NC_057685.1 (17827811..17832125, complement)

Chromosome 1 - NC_057685.1Genomic Context describing neighboring genes Neighboring gene adenosine deaminase 2-like Neighboring gene odorant receptor 46a-like Neighboring gene G patch domain-containing protein 4 Neighboring gene centrosomal protein CCDC61-like Neighboring gene putative OPA3-like protein CG13603 Neighboring gene ubiquinone biosynthesis protein COQ3, mitochondrial

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_057685.1 Chromosome 1 Reference ASM1446617v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hexosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-1,3-galactosyltransferase 1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Vespula pensylvanica Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1446617v1

Genomic

  1. NC_057685.1 Reference ASM1446617v1

    Range
    17827811..17832125 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_043829323.1 → XP_043685258.1  beta-1,3-galactosyltransferase 1-like isoform X1

    UniProtKB/TrEMBL
    A0A834UH55
    Conserved Domains (1) summary
    cl21608
    Location:133 → 327
    Galactosyl_T; Galactosyltransferase

  2. XM_043829315.1 → XP_043685250.1  beta-1,3-galactosyltransferase 1-like isoform X1

    UniProtKB/TrEMBL
    A0A834UH55
    Conserved Domains (1) summary
    cl21608
    Location:133 → 327
    Galactosyl_T; Galactosyltransferase

  3. XM_043829332.1 → XP_043685267.1  beta-1,3-galactosyltransferase 1-like isoform X2

    UniProtKB/TrEMBL
    A0A834UH55
    Conserved Domains (1) summary
    cl21608
    Location:114 → 308
    Galactosyl_T; Galactosyltransferase
Nucleotide Protein
Heading Accession and Version

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