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PIG-M Phosphatidylinositol glycan anchor biosynthesis class M [ Vespula pensylvanica (western yellowjacket) ]

Gene ID: 122629882, updated on 1-Oct-2024

Summary

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Gene symbol
PIG-M
Gene description
Phosphatidylinositol glycan anchor biosynthesis class M
Locus tag
H0235_008250
Gene type
protein coding
RefSeq status
MODEL
Organism
Vespula pensylvanica
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Vespoidea; Vespidae; Vespinae; Vespula
Orthologs
honey bee all
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Genomic context

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See PIG-M in Genome Data Viewer
Location:
chromosome: 6
Exon count:
1
Annotation release Status Assembly Chr Location
100 current ASM1446617v1 (GCF_014466175.1) 6 NC_057690.1 (7693709..7695151, complement)

Chromosome 6 - NC_057690.1Genomic Context describing neighboring genes Neighboring gene lipid droplet biogenesis associated protein seipin Neighboring gene retinoblastoma binding protein 5 Neighboring gene irregular chiasm C-roughest protein-like Neighboring gene Protein tyrosine phosphatase 99A Neighboring gene Down syndrome cell adhesion molecule-like protein Dscam2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_057690.1 Chromosome 6 Reference ASM1446617v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,4-mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables glycolipid mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in GPI anchor biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of glycosylphosphatidylinositol-mannosyltransferase I complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
GPI mannosyltransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Vespula pensylvanica Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1446617v1

Genomic

  1. NC_057690.1 Reference ASM1446617v1

    Range
    7693709..7695151 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_043813743.1 → XP_043669678.1  GPI mannosyltransferase 1

    Conserved Domains (1) summary
    cl21590
    Location:6 → 378
    PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase
Nucleotide Protein
Heading Accession and Version

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