U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC122628315 polypeptide N-acetylgalactosaminyltransferase 35A-like [ Vespula pensylvanica (western yellowjacket) ]

Gene ID: 122628315, updated on 7-Dec-2023

Summary

Go to the top of the page Help
Gene symbol
LOC122628315
Gene description
polypeptide N-acetylgalactosaminyltransferase 35A-like
Locus tag
H0235_000017
Gene type
protein coding
RefSeq status
MODEL
Organism
Vespula pensylvanica
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Vespoidea; Vespidae; Vespinae; Vespula
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC122628315 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
12
Annotation release Status Assembly Chr Location
100 current ASM1446617v1 (GCF_014466175.1) 1 NC_057685.1 (83172..89554, complement)

Chromosome 1 - NC_057685.1Genomic Context describing neighboring genes Neighboring gene glucose-induced degradation protein 4 homolog Neighboring gene gamma-glutamylcyclotransferase-like Neighboring gene uncharacterized LOC122628433 Neighboring gene methanethiol oxidase Neighboring gene sodium-coupled monocarboxylate transporter 1-like Neighboring gene uncharacterized LOC122628484

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_057685.1 Chromosome 1 Reference ASM1446617v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables Notch binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of Notch signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
polypeptide N-acetylgalactosaminyltransferase 35A-like; uncharacterized protein LOC122628315

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Vespula pensylvanica Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1446617v1

Genomic

  1. NC_057685.1 Reference ASM1446617v1

    Range
    83172..89554 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_043810508.1 → XP_043666443.1  polypeptide N-acetylgalactosaminyltransferase 35A-like isoform X1

    UniProtKB/TrEMBL
    A0A834PCZ2
    Conserved Domains (2) summary
    cd02510
    Location:148 → 442
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    pfam00652
    Location:481 → 594
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain

  2. XM_043810499.1 → XP_043666434.1  polypeptide N-acetylgalactosaminyltransferase 35A-like isoform X1

    UniProtKB/TrEMBL
    A0A834PCZ2
    Conserved Domains (2) summary
    cd02510
    Location:148 → 442
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    pfam00652
    Location:481 → 594
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain

  3. XM_043810527.1 → XP_043666462.1  polypeptide N-acetylgalactosaminyltransferase 35A-like isoform X3

    Conserved Domains (2) summary
    cd02510
    Location:148 → 442
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    cd00161
    Location:481 → 563
    RICIN; Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ...

  4. XM_043810537.1 → XP_043666472.1  polypeptide N-acetylgalactosaminyltransferase 35A-like isoform X4

    Conserved Domains (2) summary
    cd02510
    Location:148 → 442
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    cd00161
    Location:481 → 559
    RICIN; Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ...

  5. XM_043810545.1 → XP_043666480.1  polypeptide N-acetylgalactosaminyltransferase 35A-like isoform X5

    Conserved Domains (1) summary
    cd02510
    Location:148 → 442
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans

  6. XM_043810517.1 → XP_043666452.1  uncharacterized protein LOC122628315 isoform X2

    Conserved Domains (1) summary
    PTZ00341
    Location:105 → 261
    PTZ00341; Ring-infected erythrocyte surface antigen; Provisional
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases