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LOC122627604 lactosylceramide 4-alpha-galactosyltransferase-like [ Vespula pensylvanica (western yellowjacket) ]

Gene ID: 122627604, updated on 7-Dec-2023

Summary

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Gene symbol
LOC122627604
Gene description
lactosylceramide 4-alpha-galactosyltransferase-like
Locus tag
H0235_004872
Gene type
protein coding
RefSeq status
MODEL
Organism
Vespula pensylvanica
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Vespoidea; Vespidae; Vespinae; Vespula
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Genomic context

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Location:
chromosome: 3
Exon count:
5
Annotation release Status Assembly Chr Location
100 current ASM1446617v1 (GCF_014466175.1) 3 NC_057687.1 (6653203..6660516)

Chromosome 3 - NC_057687.1Genomic Context describing neighboring genes Neighboring gene transmembrane protein 145-like Neighboring gene uncharacterized LOC122627610 Neighboring gene Evr1_Alr domain-containing protein Alr Neighboring gene uncharacterized LOC122627596 Neighboring gene uncharacterized LOC122627592 Neighboring gene uncharacterized LOC122627594 Neighboring gene uncharacterized LOC122627609

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_057687.1 Chromosome 3 Reference ASM1446617v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,4-N-acetylgalactosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycosphingolipid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
lactosylceramide 4-alpha-galactosyltransferase-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Vespula pensylvanica Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1446617v1

Genomic

  1. NC_057687.1 Reference ASM1446617v1

    Range
    6653203..6660516
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_043808850.1 → XP_043664785.1  lactosylceramide 4-alpha-galactosyltransferase-like

    UniProtKB/TrEMBL
    A0A834P835
    Conserved Domains (2) summary
    pfam04572
    Location:224 → 345
    Gb3_synth; Alpha 1,4-glycosyltransferase conserved region
    cl19952
    Location:86 → 195
    Gly_transf_sug; Glycosyltransferase sugar-binding region containing DXD motif
Nucleotide Protein
Heading Accession and Version

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