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sfl N-deacetylase and N-sulfotransferase sfl [ Vespula pensylvanica (western yellowjacket) ]

Gene ID: 122627491, updated on 10-Oct-2024

Summary

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Gene symbol
sfl
Gene description
N-deacetylase and N-sulfotransferase sfl
Locus tag
H0235_005151
Gene type
protein coding
RefSeq status
MODEL
Organism
Vespula pensylvanica
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Vespoidea; Vespidae; Vespinae; Vespula
Orthologs
fruit fly honey bee all
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Genomic context

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See sfl in Genome Data Viewer
Location:
chromosome: 3
Exon count:
12
Annotation release Status Assembly Chr Location
100 current ASM1446617v1 (GCF_014466175.1) 3 NC_057687.1 (9881606..9963805, complement)

Chromosome 3 - NC_057687.1Genomic Context describing neighboring genes Neighboring gene mitochondrial calcium uniporter Neighboring gene signal sequence receptor beta Neighboring gene javelin Neighboring gene uncharacterized LOC122627497 Neighboring gene uncharacterized LOC122627498

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_057687.1 Chromosome 3 Reference ASM1446617v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables [heparan sulfate]-glucosamine N-sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables deacetylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in heparan sulfate proteoglycan biosynthetic process, polysaccharide chain biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
bifunctional heparan sulfate N-deacetylase/N-sulfotransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Vespula pensylvanica Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1446617v1

Genomic

  1. NC_057687.1 Reference ASM1446617v1

    Range
    9881606..9963805 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_043808613.1 → XP_043664548.1  bifunctional heparan sulfate N-deacetylase/N-sulfotransferase

    UniProtKB/TrEMBL
    A0A834UDN4
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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