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LOC122566920 centrosomal protein of 104 kDa [ Bombus pyrosoma ]

Gene ID: 122566920, updated on 10-Oct-2024

Summary

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Gene symbol
LOC122566920
Gene description
centrosomal protein of 104 kDa
See related
EnsemblRapid:ENSBPYG00000009399
Gene type
protein coding
RefSeq status
MODEL
Organism
Bombus pyrosoma
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Apoidea; Anthophila; Apidae; Bombus; Melanobombus
Orthologs
fruit fly honey bee all
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Genomic context

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See LOC122566920 in Genome Data Viewer
Location:
chromosome: LG4
Exon count:
16
Annotation release Status Assembly LG Location
100 current ASM1482585v1 (GCF_014825855.1) LG4 NC_057773.1 (9433260..9438392, complement)

Linkage Group LG4 - NC_057773.1Genomic Context describing neighboring genes Neighboring gene tRNA (cytosine(34)-C(5))-methyltransferase Nsun2 Neighboring gene fuzzy planar cell polarity protein-like protein Neighboring gene uncharacterized LOC122566930 Neighboring gene Down syndrome cell adhesion molecule 1 Neighboring gene Dolichyl-phosphate mannosyltransferase subunit 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_057773.1 Chromosome LG4 Reference ASM1482585v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cilium IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
centrosomal protein of 104 kDa

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bombus pyrosoma Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1482585v1

Genomic

  1. NC_057773.1 Reference ASM1482585v1

    Range
    9433260..9438392 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_043724868.1 → XP_043580803.1  centrosomal protein of 104 kDa isoform X2

    Conserved Domains (1) summary
    pfam02151
    Location:85 → 118
    UVR; UvrB/uvrC motif

  2. XM_043724867.1 → XP_043580802.1  centrosomal protein of 104 kDa isoform X1

    Related
    ENSBPYP00000015633.1, ENSBPYT00000024747.1
    Conserved Domains (1) summary
    pfam02151
    Location:187 → 220
    UVR; UvrB/uvrC motif
Nucleotide Protein
Heading Accession and Version

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