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kptn kaptin (actin binding protein) [ Chiloscyllium plagiosum (whitespotted bambooshark) ]

Gene ID: 122542771, updated on 22-Mar-2024

Summary

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Gene symbol
kptn
Gene description
kaptin (actin binding protein)
Gene type
protein coding
RefSeq status
MODEL
Organism
Chiloscyllium plagiosum
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Chondrichthyes; Elasmobranchii; Galeomorphii; Galeoidea; Orectolobiformes; Hemiscylliidae; Chiloscyllium
Orthologs
human zebrafish all
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Genomic context

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See kptn in Genome Data Viewer
Location:
chromosome: 41
Exon count:
15
Annotation release Status Assembly Chr Location
100 current ASM401019v2 (GCF_004010195.1) 41 NC_057750.1 (4926922..4959620)

Chromosome 41 - NC_057750.1Genomic Context describing neighboring genes Neighboring gene sirtuin 2 (silent mating type information regulation 2, homolog) 2 (S. cerevisiae) Neighboring gene uncharacterized LOC122542770 Neighboring gene ras and Rab interactor 3-like Neighboring gene uncharacterized LOC122542932 Neighboring gene alpha-soluble NSF attachment protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_057750.1 Chromosome 41 Reference ASM401019v2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables actin filament binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in actin filament organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cellular response to amino acid starvation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of TORC1 signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of KICSTOR complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in actin cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in lamellipodium IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
KICSTOR complex protein kaptin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chiloscyllium plagiosum Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM401019v2 Primary Assembly

Genomic

  1. NC_057750.1 Reference ASM401019v2 Primary Assembly

    Range
    4926922..4959620
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_043680800.1 → XP_043536735.1  KICSTOR complex protein kaptin isoform X2

  2. XM_043680799.1 → XP_043536734.1  KICSTOR complex protein kaptin isoform X1

  3. XM_043680798.1 → XP_043536733.1  KICSTOR complex protein kaptin isoform X1

  4. XM_043680797.1 → XP_043536732.1  KICSTOR complex protein kaptin isoform X1

  5. XM_043680801.1 → XP_043536736.1  KICSTOR complex protein kaptin isoform X3

Nucleotide Protein
Heading Accession and Version

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