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colt carnitine/acylcarnitine carrier protein colt, mitochondrial [ Frieseomelitta varia ]

Gene ID: 122534515, updated on 10-Oct-2024

Summary

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Gene symbol
colt
Gene description
carnitine/acylcarnitine carrier protein colt, mitochondrial
Locus tag
E2986_12881
Gene type
protein coding
RefSeq status
MODEL
Organism
Frieseomelitta varia
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Apoidea; Anthophila; Apidae; Frieseomelitta
Orthologs
fruit fly honey bee all
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Genomic context

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See colt in Genome Data Viewer
Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
100 current Fvar_1.2 (GCF_011392965.1) Unplaced Scaffold NW_025110377.1 (51833..57296)

NW_025110377.1Genomic Context describing neighboring genes Neighboring gene Crk proto-oncogene, adaptor protein Neighboring gene AMP-activated protein kinase alpha subunit Neighboring gene leucine-rich repeat-containing protein 15-like Neighboring gene GDP-mannose pyrophosphorylase A Neighboring gene uncharacterized LOC122534517

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_025110377 Unplaced Scaffold Reference Fvar_1.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genes involved in convergent evolution of eusociality in bees. Woodard SH, et al. Proc Natl Acad Sci U S A, 2011 May 3. PMID 21482769, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acyl carnitine transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carnitine transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mitochondrial transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrial envelope IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mitochondrial carnitine/acylcarnitine carrier protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Frieseomelitta varia Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Fvar_1.2

Genomic

  1. NW_025110377.1 Reference Fvar_1.2

    Range
    51833..57296
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_043665221.1 → XP_043521156.1  mitochondrial carnitine/acylcarnitine carrier protein isoform X2

    Conserved Domains (1) summary
    PTZ00169
    Location:74 → 225
    PTZ00169; ADP/ATP transporter on adenylate translocase; Provisional

  2. XM_043665220.1 → XP_043521155.1  mitochondrial carnitine/acylcarnitine carrier protein isoform X1

    UniProtKB/TrEMBL
    A0A833RNE6
    Conserved Domains (1) summary
    pfam00153
    Location:104 → 196
    Mito_carr; Mitochondrial carrier protein

  3. XM_043665222.1 → XP_043521157.1  mitochondrial carnitine/acylcarnitine carrier protein isoform X2

    Conserved Domains (1) summary
    PTZ00169
    Location:74 → 225
    PTZ00169; ADP/ATP transporter on adenylate translocase; Provisional
Nucleotide Protein
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