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Chc clathrin heavy chain [ Polistes fuscatus (common paper wasp) ]

Gene ID: 122526660, updated on 10-Oct-2024

Summary

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Gene symbol
Chc
Gene description
clathrin heavy chain
See related
EnsemblRapid:LOC122526660
Gene type
protein coding
RefSeq status
MODEL
Organism
Polistes fuscatus
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Vespoidea; Vespidae; Polistinae; Polistini; Polistes
Orthologs
fruit fly honey bee all
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Genomic context

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See Chc in Genome Data Viewer
Location:
chromosome: Un
Exon count:
15
Annotation release Status Assembly Chr Location
100 current CU_Pfus_HIC (GCF_010416935.1) Unplaced Scaffold NW_025113020.1 (6954452..6962375)

NW_025113020.1Genomic Context describing neighboring genes Neighboring gene mitochondrial ribosomal protein L44 Neighboring gene small nucleolar RNA Me28S-Am982 Neighboring gene ribosomal protein LP2 Neighboring gene ribonuclease P/MRP subunit POP4 Neighboring gene Rab interacting lysosomal protein like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_025113020 Unplaced Scaffold Reference CU_Pfus_HIC

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables clathrin light chain binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables structural molecule activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intracellular protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in receptor-mediated endocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell cortex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of clathrin coat of coated pit IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of clathrin coat of trans-Golgi network vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of clathrin complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in clathrin-coated endocytic vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
clathrin heavy chain

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Polistes fuscatus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CU_Pfus_HIC

Genomic

  1. NW_025113020.1 Reference CU_Pfus_HIC

    Range
    6954452..6962375
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_043650178.1 → XP_043506113.1  clathrin heavy chain

    Related
    XP_043506113.1, XM_043650178.1
    Conserved Domains (2) summary
    smart00299
    Location:1274 → 1416
    CLH; Clathrin heavy chain repeat homology
    sd00006
    Location:1105 → 1131
    TPR; TPR repeat [structural motif]
Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases