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LOC122521378 laminin subunit alpha-1 [ Polistes fuscatus (common paper wasp) ]

Gene ID: 122521378, updated on 10-May-2024

Summary

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Gene symbol
LOC122521378
Gene description
laminin subunit alpha-1
See related
EnsemblRapid:LOC122521378
Gene type
protein coding
RefSeq status
MODEL
Organism
Polistes fuscatus
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Vespoidea; Vespidae; Polistinae; Polistini; Polistes
Annotation information
Annotation category: partial on reference assembly
Orthologs
fruit fly all
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Genomic context

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See LOC122521378 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
42
Annotation release Status Assembly Chr Location
100 current CU_Pfus_HIC (GCF_010416935.1) Unplaced Scaffold NW_025112997.1 (3052628..3152275, complement)

NW_025112997.1Genomic Context describing neighboring genes Neighboring gene small ubiquitin-related modifier-like Neighboring gene programmed cell death 6-interacting protein-like protein AliX Neighboring gene uncharacterized LOC122518069 Neighboring gene uncharacterized LOC122518047 Neighboring gene kielin/chordin-like protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_025112997 Unplaced Scaffold Reference CU_Pfus_HIC

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in axon guidance IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in basement membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: laminin subunit alpha-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Polistes fuscatus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CU_Pfus_HIC

Genomic

  1. NW_025112997.1 Reference CU_Pfus_HIC

    Range
    3052628..3152275 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_043642056.1 → XP_043497991.1  LOW QUALITY PROTEIN: laminin subunit alpha-1

    Related
    XP_043497991.1, XM_043642056.1
    Conserved Domains (7) summary
    smart00180
    Location:1027 → 1072
    EGF_Lam; Laminin-type epidermal growth factor-like domai
    smart00282
    Location:2728 → 2857
    LamG; Laminin G domain
    cd00055
    Location:978 → 1023
    EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
    cd00110
    Location:2881 → 3038
    LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
    TIGR04523
    Location:1670 → 2085
    Mplasa_alph_rch; helix-rich Mycoplasma protein
    cl02548
    Location:1299 → 1424
    Laminin_B; Laminin B (Domain IV)
    cl02806
    Location:17 → 245
    Laminin_N; Laminin N-terminal (Domain VI)
Nucleotide Protein
Heading Accession and Version

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