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Hcf Host cell factor [ Leptopilina heterotoma ]

Gene ID: 122511068, updated on 10-Oct-2024

Summary

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Gene symbol
Hcf
Gene description
Host cell factor
Gene type
protein coding
RefSeq status
MODEL
Organism
Leptopilina heterotoma
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Proctotrupomorpha; Cynipoidea; Figitidae; Eucoilinae; Leptopilina
Orthologs
fruit fly honey bee all
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Genomic context

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See Hcf in Genome Data Viewer
Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
100 current ASM1547642v1 (GCF_015476425.1) Unplaced Scaffold NW_025111181.1 (555969..567016, complement)

NW_025111181.1Genomic Context describing neighboring genes Neighboring gene coatomer subunit alpha Neighboring gene grpE protein homolog, mitochondrial Roe1 Neighboring gene iron-sulfur cluster co-chaperone protein HscB-like protein, mitochondrial Neighboring gene uncharacterized LOC122511065 Neighboring gene adenylate kinase isoenzyme 6

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_025111181 Unplaced Scaffold Reference ASM1547642v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Immune Suppressive Extracellular Vesicle Proteins of Leptopilina heterotoma Are Encoded in the Wasp Genome. Wey B, et al. G3 (Bethesda), 2020 Jan 7. PMID 31676506, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription coactivator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chromatin remodeling IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of histone methyltransferase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
host cell factor 1; host cell factor

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Leptopilina heterotoma Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1547642v1

Genomic

  1. NW_025111181.1 Reference ASM1547642v1

    Range
    555969..567016 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_043626106.1 → XP_043482041.1  host cell factor 1 isoform X2

    Conserved Domains (5) summary
    PLN02193
    Location:7 → 310
    PLN02193; nitrile-specifier protein
    PRK12806
    Location:651 → 847
    PRK12806; flagellin; Provisional
    PRK08691
    Location:986 → 1180
    PRK08691; DNA polymerase III subunits gamma and tau; Validated
    cd00063
    Location:1379 → 1442
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    sd00038
    Location:188 → 239
    Kelch; KELCH repeat [structural motif]

  2. XM_043626107.1 → XP_043482042.1  host cell factor isoform X3

    Conserved Domains (5) summary
    PLN02193
    Location:7 → 310
    PLN02193; nitrile-specifier protein
    PRK12806
    Location:651 → 847
    PRK12806; flagellin; Provisional
    PRK08691
    Location:984 → 1178
    PRK08691; DNA polymerase III subunits gamma and tau; Validated
    cd00063
    Location:1378 → 1441
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    sd00038
    Location:188 → 239
    Kelch; KELCH repeat [structural motif]

  3. XM_043626105.1 → XP_043482040.1  host cell factor 1 isoform X1

    Conserved Domains (5) summary
    PLN02193
    Location:7 → 310
    PLN02193; nitrile-specifier protein
    PRK12806
    Location:651 → 847
    PRK12806; flagellin; Provisional
    PRK08691
    Location:986 → 1180
    PRK08691; DNA polymerase III subunits gamma and tau; Validated
    cd00063
    Location:1380 → 1443
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    sd00038
    Location:188 → 239
    Kelch; KELCH repeat [structural motif]
Nucleotide Protein
Heading Accession and Version

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