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Scgdelta sarcoglycan delta [ Leptopilina heterotoma ]

Gene ID: 122502435, updated on 10-Oct-2024

Summary

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Gene symbol
Scgdelta
Gene description
sarcoglycan delta
Gene type
protein coding
RefSeq status
MODEL
Organism
Leptopilina heterotoma
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Proctotrupomorpha; Cynipoidea; Figitidae; Eucoilinae; Leptopilina
Orthologs
fruit fly honey bee all
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Genomic context

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See Scgdelta in Genome Data Viewer
Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
100 current ASM1547642v1 (GCF_015476425.1) Unplaced Scaffold NW_025110946.1 (2539279..2855607, complement)

NW_025110946.1Genomic Context describing neighboring genes Neighboring gene putative mediator of RNA polymerase II transcription subunit 26 Neighboring gene uncharacterized LOC122502374 Neighboring gene uncharacterized LOC122502436 Neighboring gene uncharacterized LOC122502376 Neighboring gene uncharacterized LOC122502438

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_025110946 Unplaced Scaffold Reference ASM1547642v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cardiac muscle tissue development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in heart contraction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of sarcoglycan complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in sarcolemma IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zeta-sarcoglycan

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Leptopilina heterotoma Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1547642v1

Genomic

  1. NW_025110946.1 Reference ASM1547642v1

    Range
    2539279..2855607 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_043612486.1 → XP_043468421.1  zeta-sarcoglycan

  2. XM_043612485.1 → XP_043468420.1  zeta-sarcoglycan

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases