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SDCBP2 syndecan binding protein 2 [ Prionailurus bengalensis (leopard cat) ]

Gene ID: 122496454, updated on 22-Mar-2024

Summary

Gene symbol
SDCBP2
Gene description
syndecan binding protein 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Prionailurus bengalensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Felinae; Prionailurus
Orthologs
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Genomic context

See SDCBP2 in Genome Data Viewer
Location:
chromosome: A3
Exon count:
10
Annotation release Status Assembly Chr Location
100 current Fcat_Pben_1.1_paternal_pri (GCF_016509475.1) A3 NC_057354.1 (28400443..28418948, complement)

Chromosome A3 - NC_057354.1Genomic Context describing neighboring genes Neighboring gene RAD21 cohesin complex component like 1 Neighboring gene syntaphilin Neighboring gene FKBP prolyl isomerase 1A Neighboring gene uncharacterized LOC122496457 Neighboring gene NSFL1 cofactor

Genomic regions, transcripts, and products

Genomic Sequence:
NC_057354.1 Chromosome A3 Reference Fcat_Pben_1.1_paternal_pri Primary Assembly

General gene information

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
PubMed 

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Prionailurus bengalensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Fcat_Pben_1.1_paternal_pri Primary Assembly

Genomic

  1. NC_057354.1 Reference Fcat_Pben_1.1_paternal_pri Primary Assembly

    Range
    28400443..28418948 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_043602709.1XP_043458644.1  syntenin-2 isoform X2

    Conserved Domains (1) summary
    cd00992
    Location:102180
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
  2. XM_043602707.1XP_043458642.1  syntenin-2 isoform X1

    Conserved Domains (1) summary
    cd00992
    Location:102180
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
  3. XM_043602708.1XP_043458643.1  syntenin-2 isoform X1

    Conserved Domains (1) summary
    cd00992
    Location:102180
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...