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ALKBH8 alkB homolog 8, tRNA methyltransferase [ Prionailurus bengalensis (leopard cat) ]

Gene ID: 122482911, updated on 22-Mar-2024

Summary

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Gene symbol
ALKBH8
Gene description
alkB homolog 8, tRNA methyltransferase
Gene type
protein coding
RefSeq status
MODEL
Organism
Prionailurus bengalensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Felinae; Prionailurus
Orthologs
human mouse all
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Genomic context

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See ALKBH8 in Genome Data Viewer
Location:
chromosome: D1
Exon count:
14
Annotation release Status Assembly Chr Location
100 current Fcat_Pben_1.1_paternal_pri (GCF_016509475.1) D1 NC_057346.1 (6199007..6264080, complement)

Chromosome D1 - NC_057346.1Genomic Context describing neighboring genes Neighboring gene UPF0538 protein C2orf76-like Neighboring gene CWF19 like cell cycle control factor 2 Neighboring gene rRNA N6-adenosine-methyltransferase METTL5-like Neighboring gene ELMO domain containing 1 Neighboring gene sarcolipin

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_057346.1 Chromosome D1 Reference Fcat_Pben_1.1_paternal_pri Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 2-oxoglutarate-dependent dioxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables S-adenosylmethionine-dependent methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables tRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in tRNA wobble uridine modification IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alkylated DNA repair protein alkB homolog 8

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Prionailurus bengalensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Fcat_Pben_1.1_paternal_pri Primary Assembly

Genomic

  1. NC_057346.1 Reference Fcat_Pben_1.1_paternal_pri Primary Assembly

    Range
    6199007..6264080 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_043579229.1 → XP_043435164.1  alkylated DNA repair protein alkB homolog 8 isoform X2

    Conserved Domains (4) summary
    pfam09004
    Location:1 → 37
    DUF1891; Domain of unknown function (DUF1891)
    PRK08317
    Location:396 → 501
    PRK08317; hypothetical protein; Provisional
    smart00360
    Location:50 → 105
    RRM; RNA recognition motif
    cl21496
    Location:133 → 303
    2OG-FeII_Oxy; 2OG-Fe(II) oxygenase superfamily

  2. XM_043579226.1 → XP_043435161.1  alkylated DNA repair protein alkB homolog 8 isoform X1

    Conserved Domains (4) summary
    pfam09004
    Location:8 → 44
    DUF1891; Domain of unknown function (DUF1891)
    PRK08317
    Location:403 → 508
    PRK08317; hypothetical protein; Provisional
    smart00360
    Location:57 → 112
    RRM; RNA recognition motif
    cl21496
    Location:140 → 310
    2OG-FeII_Oxy; 2OG-Fe(II) oxygenase superfamily

  3. XM_043579233.1 → XP_043435168.1  alkylated DNA repair protein alkB homolog 8 isoform X2

    Conserved Domains (4) summary
    pfam09004
    Location:1 → 37
    DUF1891; Domain of unknown function (DUF1891)
    PRK08317
    Location:396 → 501
    PRK08317; hypothetical protein; Provisional
    smart00360
    Location:50 → 105
    RRM; RNA recognition motif
    cl21496
    Location:133 → 303
    2OG-FeII_Oxy; 2OG-Fe(II) oxygenase superfamily

  4. XM_043579227.1 → XP_043435162.1  alkylated DNA repair protein alkB homolog 8 isoform X2

    Conserved Domains (4) summary
    pfam09004
    Location:1 → 37
    DUF1891; Domain of unknown function (DUF1891)
    PRK08317
    Location:396 → 501
    PRK08317; hypothetical protein; Provisional
    smart00360
    Location:50 → 105
    RRM; RNA recognition motif
    cl21496
    Location:133 → 303
    2OG-FeII_Oxy; 2OG-Fe(II) oxygenase superfamily

  5. XM_043579234.1 → XP_043435169.1  alkylated DNA repair protein alkB homolog 8 isoform X3

    Conserved Domains (3) summary
    PRK08317
    Location:350 → 455
    PRK08317; hypothetical protein; Provisional
    smart00360
    Location:14 → 59
    RRM; RNA recognition motif
    cl21496
    Location:87 → 257
    2OG-FeII_Oxy; 2OG-Fe(II) oxygenase superfamily

  6. XM_043579231.1 → XP_043435166.1  alkylated DNA repair protein alkB homolog 8 isoform X2

    Conserved Domains (4) summary
    pfam09004
    Location:1 → 37
    DUF1891; Domain of unknown function (DUF1891)
    PRK08317
    Location:396 → 501
    PRK08317; hypothetical protein; Provisional
    smart00360
    Location:50 → 105
    RRM; RNA recognition motif
    cl21496
    Location:133 → 303
    2OG-FeII_Oxy; 2OG-Fe(II) oxygenase superfamily

  7. XM_043579230.1 → XP_043435165.1  alkylated DNA repair protein alkB homolog 8 isoform X2

    Conserved Domains (4) summary
    pfam09004
    Location:1 → 37
    DUF1891; Domain of unknown function (DUF1891)
    PRK08317
    Location:396 → 501
    PRK08317; hypothetical protein; Provisional
    smart00360
    Location:50 → 105
    RRM; RNA recognition motif
    cl21496
    Location:133 → 303
    2OG-FeII_Oxy; 2OG-Fe(II) oxygenase superfamily

  8. XM_043579235.1 → XP_043435170.1  alkylated DNA repair protein alkB homolog 8 isoform X3

    Conserved Domains (3) summary
    PRK08317
    Location:350 → 455
    PRK08317; hypothetical protein; Provisional
    smart00360
    Location:14 → 59
    RRM; RNA recognition motif
    cl21496
    Location:87 → 257
    2OG-FeII_Oxy; 2OG-Fe(II) oxygenase superfamily

  9. XM_043579232.1 → XP_043435167.1  alkylated DNA repair protein alkB homolog 8 isoform X2

    Conserved Domains (4) summary
    pfam09004
    Location:1 → 37
    DUF1891; Domain of unknown function (DUF1891)
    PRK08317
    Location:396 → 501
    PRK08317; hypothetical protein; Provisional
    smart00360
    Location:50 → 105
    RRM; RNA recognition motif
    cl21496
    Location:133 → 303
    2OG-FeII_Oxy; 2OG-Fe(II) oxygenase superfamily

  10. XM_043579228.1 → XP_043435163.1  alkylated DNA repair protein alkB homolog 8 isoform X2

    Conserved Domains (4) summary
    pfam09004
    Location:1 → 37
    DUF1891; Domain of unknown function (DUF1891)
    PRK08317
    Location:396 → 501
    PRK08317; hypothetical protein; Provisional
    smart00360
    Location:50 → 105
    RRM; RNA recognition motif
    cl21496
    Location:133 → 303
    2OG-FeII_Oxy; 2OG-Fe(II) oxygenase superfamily
Nucleotide Protein
Heading Accession and Version

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