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TMEM199 transmembrane protein 199 [ Cervus canadensis ]

Gene ID: 122448548, updated on 22-Mar-2024

Summary

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Gene symbol
TMEM199
Gene description
transmembrane protein 199
Gene type
protein coding
RefSeq status
MODEL
Organism
Cervus canadensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Cervidae; Cervinae; Cervus
Orthologs
human mouse all
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Genomic context

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See TMEM199 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
6
Annotation release Status Assembly Chr Location
100 current ASM1932006v1 (GCF_019320065.1) 1 NC_057386.1 (40460659..40465582, complement)

Chromosome 1 - NC_057386.1Genomic Context describing neighboring genes Neighboring gene vitronectin Neighboring gene SEBOX homeobox Neighboring gene DNA polymerase delta interacting protein 2 Neighboring gene TNF alpha induced protein 1 Neighboring gene intraflagellar transport 20

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_057386.1 Chromosome 1 Reference ASM1932006v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in vacuolar proton-transporting V-type ATPase complex assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endomembrane system IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transmembrane protein 199

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cervus canadensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1932006v1

Genomic

  1. NC_057386.1 Reference ASM1932006v1

    Range
    40460659..40465582 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_043479957.1 → XP_043335892.1  transmembrane protein 199 isoform X3

  2. XM_043479939.1 → XP_043335874.1  transmembrane protein 199 isoform X1

  3. XM_043479947.1 → XP_043335882.1  transmembrane protein 199 isoform X2

    Conserved Domains (1) summary
    pfam11712
    Location:75 → 198
    Vma12; Endoplasmic reticulum-based factor for assembly of V-ATPase
Nucleotide Protein
Heading Accession and Version

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