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SI sucrase-isomaltase [ Cervus canadensis ]

Gene ID: 122444972, updated on 22-Mar-2024

Summary

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Gene symbol
SI
Gene description
sucrase-isomaltase
Gene type
protein coding
RefSeq status
MODEL
Organism
Cervus canadensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Cervidae; Cervinae; Cervus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 7
Exon count:
48
Annotation release Status Assembly Chr Location
100 current ASM1932006v1 (GCF_019320065.1) 7 NC_057392.1 (76680590..76791735)

Chromosome 7 - NC_057392.1Genomic Context describing neighboring genes Neighboring gene securin-like Neighboring gene nucleolar protein of 40 kDa-like Neighboring gene uncharacterized LOC122444765 Neighboring gene uncharacterized LOC122445219

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_057392.1 Chromosome 7 Reference ASM1932006v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,4-glucosidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables carbohydrate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sucrase-isomaltase, intestinal

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cervus canadensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1932006v1

Genomic

  1. NC_057392.1 Reference ASM1932006v1

    Range
    76680590..76791735
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_043473833.1 → XP_043329768.1  sucrase-isomaltase, intestinal isoform X1

    Conserved Domains (4) summary
    smart00018
    Location:920 → 966
    PD; P or trefoil or TFF domain
    cd00111
    Location:47 → 96
    Trefoil; P or trefoil or TFF domain; Trefoil factor family domain peptides are mucin-associated molecules, largely found in epithelia of gastrointestinal tissues. Function is not known but it was originally identified from mucosal tissues, where it may have a ...
    cd06602
    Location:329 → 693
    GH31_MGAM_SI_GAA; maltase-glucoamylase, sucrase-isomaltase, lysosomal acid alpha-glucosidase
    cd14752
    Location:220 → 329
    GH31_N; N-terminal domain of glycosyl hydrolase family 31 (GH31)

  2. XM_043473834.1 → XP_043329769.1  sucrase-isomaltase, intestinal isoform X2

    Conserved Domains (3) summary
    smart00018
    Location:833 → 879
    PD; P or trefoil or TFF domain
    cd06602
    Location:242 → 606
    GH31_MGAM_SI_GAA; maltase-glucoamylase, sucrase-isomaltase, lysosomal acid alpha-glucosidase
    cd14752
    Location:133 → 242
    GH31_N; N-terminal domain of glycosyl hydrolase family 31 (GH31)

RNA

  1. XR_006270399.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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