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PLA2G4F phospholipase A2 group IVF [ Cervus canadensis ]

Gene ID: 122444121, updated on 22-Mar-2024

Summary

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Gene symbol
PLA2G4F
Gene description
phospholipase A2 group IVF
Gene type
protein coding
RefSeq status
MODEL
Organism
Cervus canadensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Cervidae; Cervinae; Cervus
Orthologs
human mouse all
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Genomic context

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See PLA2G4F in Genome Data Viewer
Location:
chromosome: 6
Exon count:
20
Annotation release Status Assembly Chr Location
100 current ASM1932006v1 (GCF_019320065.1) 6 NC_057391.1 (38472041..38488168, complement)

Chromosome 6 - NC_057391.1Genomic Context describing neighboring genes Neighboring gene phospholipase A2 group IVE Neighboring gene phospholipase A2 group IVD Neighboring gene VPS39 subunit of HOPS complex Neighboring gene transmembrane protein 87A Neighboring gene glucosidase alpha, neutral C

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_057391.1 Chromosome 6 Reference ASM1932006v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium-dependent phospholipase A2 activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium-dependent phospholipid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycerophospholipid catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cytosolic phospholipase A2 zeta

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cervus canadensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1932006v1

Genomic

  1. NC_057391.1 Reference ASM1932006v1

    Range
    38472041..38488168 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_043472925.1 → XP_043328860.1  cytosolic phospholipase A2 zeta isoform X2

    Conserved Domains (2) summary
    cd04036
    Location:46 → 163
    C2_cPLA2; C2 domain present in cytosolic PhosphoLipase A2 (cPLA2)
    cl11396
    Location:299 → 838
    Patatin_and_cPLA2; Patatins and Phospholipases

  2. XM_043472924.1 → XP_043328859.1  cytosolic phospholipase A2 zeta isoform X1

    Conserved Domains (2) summary
    cd04036
    Location:46 → 181
    C2_cPLA2; C2 domain present in cytosolic PhosphoLipase A2 (cPLA2)
    cl11396
    Location:317 → 856
    Patatin_and_cPLA2; Patatins and Phospholipases
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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