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INPP5E inositol polyphosphate-5-phosphatase E [ Cervus canadensis ]

Gene ID: 122442337, updated on 22-Mar-2024

Summary

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Gene symbol
INPP5E
Gene description
inositol polyphosphate-5-phosphatase E
Gene type
protein coding
RefSeq status
MODEL
Organism
Cervus canadensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Cervidae; Cervinae; Cervus
Orthologs
human mouse all
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Genomic context

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See INPP5E in Genome Data Viewer
Location:
chromosome: 5
Exon count:
11
Annotation release Status Assembly Chr Location
100 current ASM1932006v1 (GCF_019320065.1) 5 NC_057390.1 (98789092..98799516, complement)

Chromosome 5 - NC_057390.1Genomic Context describing neighboring genes Neighboring gene endosome associated trafficking regulator 1 Neighboring gene peptidase, mitochondrial processing subunit alpha Neighboring gene SEC16 homolog A, endoplasmic reticulum export factor Neighboring gene notch receptor 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_057390.1 Chromosome 5 Reference ASM1932006v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables inositol-polyphosphate 5-phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in phosphatidylinositol dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phosphatidylinositol polyphosphate 5-phosphatase type IV

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cervus canadensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1932006v1

Genomic

  1. NC_057390.1 Reference ASM1932006v1

    Range
    98789092..98799516 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_043470072.1 → XP_043326007.1  phosphatidylinositol polyphosphate 5-phosphatase type IV isoform X2

    Conserved Domains (1) summary
    cd09095
    Location:307 → 602
    INPP5c_INPP5E-like; Catalytic inositol polyphosphate 5-phosphatase (INPP5c) domain of Inositol polyphosphate-5-phosphatase E and related proteins

  2. XM_043470073.1 → XP_043326008.1  phosphatidylinositol polyphosphate 5-phosphatase type IV isoform X3

    Conserved Domains (1) summary
    cd09095
    Location:307 → 605
    INPP5c_INPP5E-like; Catalytic inositol polyphosphate 5-phosphatase (INPP5c) domain of Inositol polyphosphate-5-phosphatase E and related proteins

  3. XM_043470071.1 → XP_043326006.1  phosphatidylinositol polyphosphate 5-phosphatase type IV isoform X1

    Conserved Domains (1) summary
    cd09095
    Location:307 → 605
    INPP5c_INPP5E-like; Catalytic inositol polyphosphate 5-phosphatase (INPP5c) domain of Inositol polyphosphate-5-phosphatase E and related proteins
Nucleotide Protein
Heading Accession and Version

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