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LOC122399063 protein O-mannosyl-transferase TMTC4-like [ Colletes gigas ]

Gene ID: 122399063, updated on 1-Oct-2024

Summary

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Gene symbol
LOC122399063
Gene description
protein O-mannosyl-transferase TMTC4-like
See related
EnsemblRapid:ENSCGGG00000011192
Gene type
protein coding
RefSeq status
MODEL
Organism
Colletes gigas
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Apoidea; Anthophila; Colletidae; Colletinae; Colletes
Orthologs
honey bee all
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Genomic context

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See LOC122399063 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
100 current ASM1312311v1 (GCF_013123115.1) Unplaced Scaffold NW_025106631.1 (8964736..8967905, complement)

NW_025106631.1Genomic Context describing neighboring genes Neighboring gene desmosome associated protein-like protein pinnin Neighboring gene paired box protein Pax-1-like Neighboring gene proximal sequence element A Pbp49 Neighboring gene Mitochondrial inner membrane protein MPV17 Neighboring gene glutamate--cysteine ligase

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_025106631 Unplaced Scaffold Reference ASM1312311v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in endoplasmic reticulum unfolded protein response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein O-linked mannosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein O-mannosyl-transferase TMTC4-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Colletes gigas Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1312311v1

Genomic

  1. NW_025106631.1 Reference ASM1312311v1

    Range
    8964736..8967905 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_043399434.1 → XP_043255369.1  protein O-mannosyl-transferase TMTC4-like

    Related
    ENSCGGP00000016027.1, ENSCGGT00000001434.1
    Conserved Domains (2) summary
    COG0457
    Location:459 → 697
    TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
    sd00006
    Location:494 → 522
    TPR; TPR repeat [structural motif]
Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases