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Scgdelta sarcoglycan delta [ Colletes gigas ]

Gene ID: 122397750, updated on 5-Oct-2024

Summary

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Gene symbol
Scgdelta
Gene description
sarcoglycan delta
See related
EnsemblRapid:ENSCGGG00000005779
Gene type
protein coding
RefSeq status
MODEL
Organism
Colletes gigas
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Apoidea; Anthophila; Colletidae; Colletinae; Colletes
Orthologs
honey bee all
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Genomic context

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See Scgdelta in Genome Data Viewer
Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
100 current ASM1312311v1 (GCF_013123115.1) Unplaced Scaffold NW_025106639.1 (9258328..9392885, complement)

NW_025106639.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC122397631 Neighboring gene phosphodiesterase 8 Neighboring gene uncharacterized LOC122397938 Neighboring gene proton channel OtopLc-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_025106639 Unplaced Scaffold Reference ASM1312311v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cardiac muscle tissue development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in heart contraction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of sarcoglycan complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in sarcolemma IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zeta-sarcoglycan-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Colletes gigas Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1312311v1

Genomic

  1. NW_025106639.1 Reference ASM1312311v1

    Range
    9258328..9392885 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_043397124.1 → XP_043253059.1  zeta-sarcoglycan-like isoform X1

    Related
    ENSCGGP00000006165.1, ENSCGGT00000010850.1

  2. XM_043397126.1 → XP_043253061.1  zeta-sarcoglycan-like isoform X2

  3. XM_043397125.1 → XP_043253060.1  zeta-sarcoglycan-like isoform X2

    Related
    ENSCGGP00000006167.1, ENSCGGT00000010849.1
Nucleotide Protein
Heading Accession and Version

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