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pofut2 protein O-fucosyltransferase 2 [ Puntigrus tetrazona (Sumatra barb) ]

Gene ID: 122351286, updated on 22-Mar-2024

Summary

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Gene symbol
pofut2
Gene description
protein O-fucosyltransferase 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Puntigrus tetrazona
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Smiliogastrinae; Puntigrus
Orthologs
human zebrafish all
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Genomic context

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See pofut2 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
9
Annotation release Status Assembly Chr Location
100 current ASM1883169v1 (GCF_018831695.1) 9 NC_056707.1 (19636451..19642933, complement)

Chromosome 9 - NC_056707.1Genomic Context describing neighboring genes Neighboring gene BRCA1 associated RING domain 1 Neighboring gene ATP-binding cassette, sub-family A (ABC1), member 12 Neighboring gene 3-hydroxyisobutyryl-CoA hydrolase Neighboring gene uncharacterized LOC122351289 Neighboring gene myostatin b

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_056707.1 Chromosome 9 Reference ASM1883169v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables peptide-O-fucosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein O-linked fucosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
GDP-fucose protein O-fucosyltransferase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Puntigrus tetrazona Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1883169v1 Primary Assembly

Genomic

  1. NC_056707.1 Reference ASM1883169v1 Primary Assembly

    Range
    19636451..19642933 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_043248250.1 → XP_043104185.1  GDP-fucose protein O-fucosyltransferase 2

    Conserved Domains (1) summary
    cd11298
    Location:60 → 429
    O-FucT-2; GDP-fucose protein O-fucosyltransferase 2
Nucleotide Protein
Heading Accession and Version

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