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si:dkeyp-82a1.6 torsin-1A-interacting protein 2 [ Puntigrus tetrazona (Sumatra barb) ]

Gene ID: 122350467, updated on 8-May-2024

Summary

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Gene symbol
si:dkeyp-82a1.6
Gene description
torsin-1A-interacting protein 2
See related
EnsemblRapid:ENSPRZG00000012965
Gene type
protein coding
RefSeq status
MODEL
Organism
Puntigrus tetrazona
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Smiliogastrinae; Puntigrus
Orthologs
zebrafish all
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Genomic context

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See si:dkeyp-82a1.6 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
9
Annotation release Status Assembly Chr Location
100 current ASM1883169v1 (GCF_018831695.1) 8 NC_056706.1 (10280303..10284362, complement)

Chromosome 8 - NC_056706.1Genomic Context describing neighboring genes Neighboring gene HAUS augmin-like complex, subunit 5 Neighboring gene uncharacterized LOC122350469 Neighboring gene uncharacterized LOC122350468 Neighboring gene 4-trimethylaminobutyraldehyde dehydrogenase A

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_056706.1 Chromosome 8 Reference ASM1883169v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATPase activator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in membrane organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
torsin-1A-interacting protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Puntigrus tetrazona Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1883169v1 Primary Assembly

Genomic

  1. NC_056706.1 Reference ASM1883169v1 Primary Assembly

    Range
    10280303..10284362 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_043246948.1 → XP_043102883.1  torsin-1A-interacting protein 2 isoform X2

    Related
    ENSPRZP00000020283.1, ENSPRZT00000026230.1

  2. XM_043246947.1 → XP_043102882.1  torsin-1A-interacting protein 2 isoform X1

    Related
    ENSPRZP00000020287.1, ENSPRZT00000026234.1
Nucleotide Protein
Heading Accession and Version

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