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gxylt1b glucoside xylosyltransferase 1b [ Puntigrus tetrazona (Sumatra barb) ]

Gene ID: 122342612, updated on 8-May-2024

Summary

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Gene symbol
gxylt1b
Gene description
glucoside xylosyltransferase 1b
See related
EnsemblRapid:ENSPRZG00000031189
Gene type
protein coding
RefSeq status
MODEL
Organism
Puntigrus tetrazona
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Smiliogastrinae; Puntigrus
Orthologs
zebrafish all
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Genomic context

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See gxylt1b in Genome Data Viewer
Location:
chromosome: 4
Exon count:
7
Annotation release Status Assembly Chr Location
100 current ASM1883169v1 (GCF_018831695.1) 4 NC_056702.1 (6934093..6940296, complement)

Chromosome 4 - NC_056702.1Genomic Context describing neighboring genes Neighboring gene contactin 1b Neighboring gene PDZ domain containing ring finger 4 Neighboring gene YY1 associated factor 2 Neighboring gene zinc finger CCHC-type and RNA binding motif 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_056702.1 Chromosome 4 Reference ASM1883169v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-xylosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in O-glycan processing IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glucoside xylosyltransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Puntigrus tetrazona Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1883169v1 Primary Assembly

Genomic

  1. NC_056702.1 Reference ASM1883169v1 Primary Assembly

    Range
    6934093..6940296 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_043236564.1 → XP_043092499.1  glucoside xylosyltransferase 1 isoform X2

    Related
    ENSPRZP00000065715.1, ENSPRZT00000075483.1
    Conserved Domains (1) summary
    cd06430
    Location:83 → 386
    GT8_like_2; GT8_like_2 represents a subfamily of GT8 with unknown function

  2. XM_043236563.1 → XP_043092498.1  glucoside xylosyltransferase 1 isoform X1

    Conserved Domains (1) summary
    cd06430
    Location:83 → 355
    GT8_like_2; GT8_like_2 represents a subfamily of GT8 with unknown function

  3. XM_043236565.1 → XP_043092500.1  glucoside xylosyltransferase 1 isoform X3

    Conserved Domains (1) summary
    cl11394
    Location:83 → 298
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold
Nucleotide Protein
Heading Accession and Version

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