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pde9aa phosphodiesterase 9aa [ Puntigrus tetrazona (Sumatra barb) ]

Gene ID: 122332293, updated on 8-May-2024

Summary

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Gene symbol
pde9aa
Gene description
phosphodiesterase 9aa
See related
EnsemblRapid:ENSPRZG00000008625
Gene type
protein coding
RefSeq status
MODEL
Organism
Puntigrus tetrazona
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Smiliogastrinae; Puntigrus
Orthologs
human zebrafish all
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Genomic context

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See pde9aa in Genome Data Viewer
Location:
chromosome: Un
Exon count:
20
Annotation release Status Assembly Chr Location
100 current ASM1883169v1 (GCF_018831695.1) Unplaced Scaffold NW_025047688.1 (1890917..1910273, complement)

NW_025047688.1Genomic Context describing neighboring genes Neighboring gene pbx/knotted 1 homeobox 1.1 Neighboring gene uncharacterized LOC122332291 Neighboring gene NADH:ubiquinone oxidoreductase subunit V3 Neighboring gene WD repeat domain 4 Neighboring gene solute carrier family 37 member 1 Neighboring gene uncharacterized LOC122332300 Neighboring gene 5-hydroxytryptamine receptor 1F-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_025047688 Unplaced Scaffold Reference ASM1883169v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 3',5'-cyclic-GMP phosphodiesterase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cGMP catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cGMP-mediated signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
high affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Puntigrus tetrazona Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1883169v1 Primary Assembly

Genomic

  1. NW_025047688.1 Reference ASM1883169v1 Primary Assembly

    Range
    1890917..1910273 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_043229599.1 → XP_043085534.1  high affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A isoform X1

    Related
    ENSPRZP00000008432.1, ENSPRZT00000014051.1
    Conserved Domains (1) summary
    cd00077
    Location:243 → 416
    HDc; Metal dependent phosphohydrolases with conserved 'HD' motif

  2. XM_043229600.1 → XP_043085535.1  high affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A isoform X2

    Related
    ENSPRZP00000008425.1, ENSPRZT00000014040.1
    Conserved Domains (1) summary
    cd00077
    Location:243 → 416
    HDc; Metal dependent phosphohydrolases with conserved 'HD' motif

  3. XM_043229601.1 → XP_043085536.1  high affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A isoform X3

    Related
    ENSPRZP00000008437.1, ENSPRZT00000014060.1
    Conserved Domains (1) summary
    cd00077
    Location:243 → 416
    HDc; Metal dependent phosphohydrolases with conserved 'HD' motif
Nucleotide Protein
Heading Accession and Version

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