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colgalt2a collagen beta(1-O)galactosyltransferase 2a [ Puntigrus tetrazona (Sumatra barb) ]

Gene ID: 122324914, updated on 8-May-2024

Summary

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Gene symbol
colgalt2a
Gene description
collagen beta(1-O)galactosyltransferase 2a
See related
EnsemblRapid:ENSPRZG00000023824
Gene type
protein coding
RefSeq status
MODEL
Organism
Puntigrus tetrazona
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Smiliogastrinae; Puntigrus
Orthologs
zebrafish all
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Genomic context

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See colgalt2a in Genome Data Viewer
Location:
chromosome: 2
Exon count:
12
Annotation release Status Assembly Chr Location
100 current ASM1883169v1 (GCF_018831695.1) 2 NC_056700.1 (1525748..1532557, complement)

Chromosome 2 - NC_056700.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC122360826 Neighboring gene uncharacterized LOC122324916 Neighboring gene ring finger and CCCH-type domains 1b Neighboring gene uncharacterized LOC122356554

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_056700.1 Chromosome 2 Reference ASM1883169v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables procollagen galactosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
procollagen galactosyltransferase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Puntigrus tetrazona Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1883169v1 Primary Assembly

Genomic

  1. NC_056700.1 Reference ASM1883169v1 Primary Assembly

    Range
    1525748..1532557 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_043219676.1 → XP_043075611.1  procollagen galactosyltransferase 2

    Related
    ENSPRZP00000048942.1, ENSPRZT00000056381.1
    Conserved Domains (2) summary
    cd06532
    Location:332 → 515
    Glyco_transf_25; Glycosyltransferase family 25 [lipooligosaccharide (LOS) biosynthesis protein] is a family of glycosyltransferases involved in LOS biosynthesis. The members include the beta(1,4) galactosyltransferases: Lgt2 of Moraxella catarrhalis, LgtB and LgtE of ...
    cl11394
    Location:44 → 159
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold
Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases