U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC122301951 F-box protein GID2-like [ Carya illinoinensis ]

Gene ID: 122301951, updated on 7-Dec-2023

Summary

Go to the top of the page Help
Gene symbol
LOC122301951
Gene description
F-box protein GID2-like
Locus tag
CIPAW_02G005700
Gene type
protein coding
RefSeq status
MODEL
Organism
Carya illinoinensis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Carya
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC122301951 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
1
Annotation release Status Assembly Chr Location
100 current C.illinoinensisPawnee_v1 (GCF_018687715.1) 2 NC_056753.1 (1218827..1219646)

Chromosome 2 - NC_056753.1Genomic Context describing neighboring genes Neighboring gene probable indole-3-acetic acid-amido synthetase GH3.1 Neighboring gene probable receptor-like protein kinase At5g24010 Neighboring gene uncharacterized LOC122301952 Neighboring gene protein MRG1

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_056753.1 Chromosome 2 Reference C.illinoinensisPawnee_v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in gibberellic acid mediated signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of gibberellic acid mediated signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of SCF ubiquitin ligase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
F-box protein GID2-like

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Carya illinoinensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference C.illinoinensisPawnee_v1 Primary Assembly

Genomic

  1. NC_056753.1 Reference C.illinoinensisPawnee_v1 Primary Assembly

    Range
    1218827..1219646
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_043113295.1 → XP_042969229.1  F-box protein GID2-like

    UniProtKB/TrEMBL
    A0A8T1RAV8, A0A922FRT2
    Conserved Domains (1) summary
    pfam00646
    Location:34 → 77
    F-box; F-box domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.