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LOC122276499 carboxyl-terminal-processing peptidase 3, chloroplastic [ Carya illinoinensis ]

Gene ID: 122276499, updated on 7-Dec-2023

Summary

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Gene symbol
LOC122276499
Gene description
carboxyl-terminal-processing peptidase 3, chloroplastic
Locus tag
CIPAW_09G034600
Gene type
protein coding
RefSeq status
MODEL
Organism
Carya illinoinensis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Carya
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Genomic context

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See LOC122276499 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
12
Annotation release Status Assembly Chr Location
100 current C.illinoinensisPawnee_v1 (GCF_018687715.1) 9 NC_056760.1 (3493720..3499160, complement)

Chromosome 9 - NC_056760.1Genomic Context describing neighboring genes Neighboring gene zinc finger A20 and AN1 domain-containing stress-associated protein 8-like Neighboring gene serine/threonine-protein kinase Nek6-like Neighboring gene zinc finger protein WIP2-like Neighboring gene DNA-directed RNA polymerase I subunit 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_056760.1 Chromosome 9 Reference C.illinoinensisPawnee_v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. RNA-Seq Analysis of Developing Pecan (Carya illinoinensis) Embryos Reveals Parallel Expression Patterns among Allergen and Lipid Metabolism Genes. Mattison CP, et al. J Agric Food Chem, 2017 Feb 22. PMID 28121438

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables endopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables serine-type peptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proteolysis IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
carboxyl-terminal-processing peptidase 3, chloroplastic

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Carya illinoinensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference C.illinoinensisPawnee_v1 Primary Assembly

Genomic

  1. NC_056760.1 Reference C.illinoinensisPawnee_v1 Primary Assembly

    Range
    3493720..3499160 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_043086274.1 → XP_042942208.1  carboxyl-terminal-processing peptidase 3, chloroplastic

    UniProtKB/TrEMBL
    A0A8T1PI74
    Conserved Domains (1) summary
    PLN00049
    Location:124 → 471
    PLN00049; carboxyl-terminal processing protease; Provisional
Nucleotide Protein
Heading Accession and Version

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