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LOC122274120 rab5 GDP/GTP exchange factor-like [ Parasteatoda tepidariorum (common house spider) ]

Gene ID: 122274120, updated on 7-Dec-2023

Summary

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Gene symbol
LOC122274120
Gene description
rab5 GDP/GTP exchange factor-like
See related
EnsemblRapid:LOC122274120
Gene type
protein coding
RefSeq status
MODEL
Organism
Parasteatoda tepidariorum
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Chelicerata; Arachnida; Araneae; Araneomorphae; Entelegynae; Araneoidea; Theridiidae; Parasteatoda
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Genomic context

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See LOC122274120 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
2
Annotation release Status Assembly Chr Location
102 current Ptep_3.0 (GCF_000365465.3) Unplaced Scaffold NW_024993188.1 (244..1328, complement)

NW_024993188.1Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_024993188 Unplaced Scaffold Reference Ptep_3.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables guanyl-nucleotide exchange factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables small GTPase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endocytic vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
rab5 GDP/GTP exchange factor-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Parasteatoda tepidariorum Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Ptep_3.0

Genomic

  1. NW_024993188.1 Reference Ptep_3.0

    Range
    244..1328 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_043058060.1 → XP_042913994.1  rab5 GDP/GTP exchange factor-like

    Related
    XP_042913994.1, XM_043058060.1
    Conserved Domains (1) summary
    pfam02204
    Location:24 → 112
    VPS9; Vacuolar sorting protein 9 (VPS9) domain
Nucleotide Protein Strain
Heading Accession and Version

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