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Fnta farnesyl transferase alpha [ Penaeus japonicus ]

Gene ID: 122257761, updated on 2-Jul-2024

Summary

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Gene symbol
Fnta
Gene description
farnesyl transferase alpha
See related
EnsemblRapid:LOC122257761
Gene type
protein coding
RefSeq status
MODEL
Organism
Penaeus japonicus
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Crustacea; Multicrustacea; Malacostraca; Eumalacostraca; Eucarida; Decapoda; Dendrobranchiata; Penaeoidea; Penaeidae; Penaeus
Orthologs
fruit fly all
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Genomic context

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See Fnta in Genome Data Viewer
Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
100 current Mj_TUMSAT_v1.0 (GCF_017312705.1) Unplaced Scaffold NW_025031747.1 (156076..200798)

NW_025031747.1Genomic Context describing neighboring genes Neighboring gene LIM domain only protein 7-like Neighboring gene cysteine-rich with EGF-like domain protein 2 Neighboring gene RNA-binding protein NOB1-like Neighboring gene protein ALP1-like Neighboring gene galactosylceramide sulfotransferase-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_025031747 Unplaced Scaffold Reference Mj_TUMSAT_v1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables CAAX-protein geranylgeranyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein farnesyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein farnesylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein geranylgeranylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of CAAX-protein geranylgeranyltransferase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of protein farnesyltransferase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Penaeus japonicus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mj_TUMSAT_v1.0 Primary Assembly

Genomic

  1. NW_025031747.1 Reference Mj_TUMSAT_v1.0 Primary Assembly

    Range
    156076..200798
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_043023258.1 → XP_042879192.1  protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha-like

    Related
    XP_042879192.1, XM_043023258.1
    Conserved Domains (1) summary
    PLN02789
    Location:13 → 319
    PLN02789; farnesyltranstransferase

  2. XM_043023259.1 → XP_042879193.1  protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha-like

    Related
    XP_042879193.1, XM_043023259.1
    Conserved Domains (1) summary
    PLN02789
    Location:13 → 319
    PLN02789; farnesyltranstransferase

  3. XM_043023260.1 → XP_042879194.1  protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha-like

    Related
    XP_042879194.1, XM_043023260.1
    Conserved Domains (1) summary
    PLN02789
    Location:13 → 319
    PLN02789; farnesyltranstransferase
Nucleotide Protein
Heading Accession and Version

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