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LGMNP1 legumain pseudogene 1 [ Homo sapiens (human) ]

Gene ID: 122199, updated on 17-Sep-2024

Summary

Official Symbol
LGMNP1provided by HGNC
Official Full Name
legumain pseudogene 1provided by HGNC
Primary source
HGNC:HGNC:23079
See related
AllianceGenome:HGNC:23079
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
LGMN2P
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Genomic context

See LGMNP1 in Genome Data Viewer
Location:
13q21.31
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 13 NC_000013.11 (64957561..64959518, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 13 NC_060937.1 (64176700..64178657, complement)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 13 NC_000013.10 (65531693..65533650, complement)

Chromosome 13 - NC_000013.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105370239 Neighboring gene uncharacterized LOC105370240 Neighboring gene Sharpr-MPRA regulatory region 870 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr13:65360601-65361800 Neighboring gene Sharpr-MPRA regulatory region 7062 Neighboring gene Sharpr-MPRA regulatory region 6918 Neighboring gene steroidogenic acute regulatory protein pseudogene 1 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr13:66158003-66158809 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr13:66159580-66160141 Neighboring gene Sharpr-MPRA regulatory region 7593 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr13:66251524-66252723 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr13:66358127-66359028 Neighboring gene heterogeneous nuclear ribonucleoprotein A3 pseudogene 5

Genomic regions, transcripts, and products

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_001534.6 

    Range
    101..2058
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000013.11 Reference GRCh38.p14 Primary Assembly

    Range
    64957561..64959518 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060937.1 Alternate T2T-CHM13v2.0

    Range
    64176700..64178657 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)