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Zmiz2 zinc finger MIZ-type containing 2 [ Dipodomys spectabilis (banner-tailed kangaroo rat) ]

Gene ID: 122128063, updated on 22-Mar-2024

Summary

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Gene symbol
Zmiz2
Gene description
zinc finger MIZ-type containing 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Dipodomys spectabilis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Castorimorpha; Heteromyidae; Dipodomyinae; Dipodomys
Orthologs
human mouse all
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Genomic context

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See Zmiz2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
23
Annotation release Status Assembly Chr Location
100 current ASM1905484v1 (GCF_019054845.1) Unplaced Scaffold NW_024870999.1 (806559..828647)

NW_024870999.1Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene oxoglutarate dehydrogenase Neighboring gene histone H2A.V Neighboring gene peptidylprolyl isomerase A

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_024870999 Unplaced Scaffold Reference ASM1905484v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables SUMO ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nuclear receptor coactivator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein sumoylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger MIZ domain-containing protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Dipodomys spectabilis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1905484v1

Genomic

  1. NW_024870999.1 Reference ASM1905484v1

    Range
    806559..828647
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_042702389.1 → XP_042558323.1  zinc finger MIZ domain-containing protein 2 isoform X1

    Conserved Domains (3) summary
    TIGR01628
    Location:181 → 290
    PABP-1234; polyadenylate binding protein, human types 1, 2, 3, 4 family
    PHA03247
    Location:676 → 875
    PHA03247; large tegument protein UL36; Provisional
    cd16791
    Location:597 → 644
    SP-RING_ZMIZ; SP-RING finger found in zinc finger MIZ domain-containing protein Zmiz1, Zmiz2, and similar proteins

  2. XM_042702386.1 → XP_042558320.1  zinc finger MIZ domain-containing protein 2 isoform X1

    Conserved Domains (3) summary
    TIGR01628
    Location:181 → 290
    PABP-1234; polyadenylate binding protein, human types 1, 2, 3, 4 family
    PHA03247
    Location:676 → 875
    PHA03247; large tegument protein UL36; Provisional
    cd16791
    Location:597 → 644
    SP-RING_ZMIZ; SP-RING finger found in zinc finger MIZ domain-containing protein Zmiz1, Zmiz2, and similar proteins

  3. XM_042702390.1 → XP_042558324.1  zinc finger MIZ domain-containing protein 2 isoform X2

    Conserved Domains (3) summary
    TIGR01628
    Location:181 → 290
    PABP-1234; polyadenylate binding protein, human types 1, 2, 3, 4 family
    PHA03247
    Location:650 → 849
    PHA03247; large tegument protein UL36; Provisional
    cd16791
    Location:571 → 618
    SP-RING_ZMIZ; SP-RING finger found in zinc finger MIZ domain-containing protein Zmiz1, Zmiz2, and similar proteins

  4. XM_042702385.1 → XP_042558319.1  zinc finger MIZ domain-containing protein 2 isoform X1

    Conserved Domains (3) summary
    TIGR01628
    Location:181 → 290
    PABP-1234; polyadenylate binding protein, human types 1, 2, 3, 4 family
    PHA03247
    Location:676 → 875
    PHA03247; large tegument protein UL36; Provisional
    cd16791
    Location:597 → 644
    SP-RING_ZMIZ; SP-RING finger found in zinc finger MIZ domain-containing protein Zmiz1, Zmiz2, and similar proteins

  5. XM_042702391.1 → XP_042558325.1  zinc finger MIZ domain-containing protein 2 isoform X3

    Conserved Domains (2) summary
    PHA03247
    Location:650 → 849
    PHA03247; large tegument protein UL36; Provisional
    cd16791
    Location:571 → 618
    SP-RING_ZMIZ; SP-RING finger found in zinc finger MIZ domain-containing protein Zmiz1, Zmiz2, and similar proteins

  6. XM_042702387.1 → XP_042558321.1  zinc finger MIZ domain-containing protein 2 isoform X1

    Conserved Domains (3) summary
    TIGR01628
    Location:181 → 290
    PABP-1234; polyadenylate binding protein, human types 1, 2, 3, 4 family
    PHA03247
    Location:676 → 875
    PHA03247; large tegument protein UL36; Provisional
    cd16791
    Location:597 → 644
    SP-RING_ZMIZ; SP-RING finger found in zinc finger MIZ domain-containing protein Zmiz1, Zmiz2, and similar proteins

  7. XM_042702388.1 → XP_042558322.1  zinc finger MIZ domain-containing protein 2 isoform X1

    Conserved Domains (3) summary
    TIGR01628
    Location:181 → 290
    PABP-1234; polyadenylate binding protein, human types 1, 2, 3, 4 family
    PHA03247
    Location:676 → 875
    PHA03247; large tegument protein UL36; Provisional
    cd16791
    Location:597 → 644
    SP-RING_ZMIZ; SP-RING finger found in zinc finger MIZ domain-containing protein Zmiz1, Zmiz2, and similar proteins
Nucleotide Protein
Heading Accession and Version

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