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Lman2l lectin, mannose binding 2 like [ Dipodomys spectabilis (banner-tailed kangaroo rat) ]

Gene ID: 122121323, updated on 19-Jun-2024

Summary

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Gene symbol
Lman2l
Gene description
lectin, mannose binding 2 like
Gene type
protein coding
RefSeq status
MODEL
Organism
Dipodomys spectabilis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Castorimorpha; Heteromyidae; Dipodomyinae; Dipodomys
Orthologs
human mouse all
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Genomic context

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See Lman2l in Genome Data Viewer
Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
100 current ASM1905484v1 (GCF_019054845.1) Unplaced Scaffold NW_024870864.1 (2921332..2951496, complement)

NW_024870864.1Genomic Context describing neighboring genes Neighboring gene KAT8 regulatory NSL complex subunit 3 Neighboring gene fer-1 like family member 5 Neighboring gene cyclin and CBS domain divalent metal cation transport mediator 4 Neighboring gene cyclin and CBS domain divalent metal cation transport mediator 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_024870864 Unplaced Scaffold Reference ASM1905484v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables D-mannose binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in Golgi organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endoplasmic reticulum organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endoplasmic reticulum to Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in COPII-coated ER to Golgi transport vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum-Golgi intermediate compartment IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
VIP36-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Dipodomys spectabilis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1905484v1

Genomic

  1. NW_024870864.1 Reference ASM1905484v1

    Range
    2921332..2951496 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_042695486.1 → XP_042551420.1  VIP36-like protein isoform X1

    Conserved Domains (1) summary
    cl14058
    Location:49 → 297
    lectin_L-type; legume lectins

  2. XM_042695489.1 → XP_042551423.1  VIP36-like protein isoform X4

    Conserved Domains (1) summary
    cl14058
    Location:49 → 308
    lectin_L-type; legume lectins

  3. XM_042695487.1 → XP_042551421.1  VIP36-like protein isoform X2

    Conserved Domains (1) summary
    cl14058
    Location:2 → 224
    lectin_L-type; legume lectins

  4. XM_042695488.1 → XP_042551422.1  VIP36-like protein isoform X3

    Conserved Domains (1) summary
    cl14058
    Location:24 → 153
    lectin_L-type; legume lectins
Nucleotide Protein
Heading Accession and Version

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