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LOC122116573 mannose-binding protein A-like [ Dipodomys spectabilis (banner-tailed kangaroo rat) ]

Gene ID: 122116573, updated on 16-Nov-2023

Summary

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Gene symbol
LOC122116573
Gene description
mannose-binding protein A-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Dipodomys spectabilis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Castorimorpha; Heteromyidae; Dipodomyinae; Dipodomys
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Genomic context

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See LOC122116573 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
100 current ASM1905484v1 (GCF_019054845.1) Unplaced Scaffold NW_024870813.1 (6460321..6465523)

NW_024870813.1Genomic Context describing neighboring genes Neighboring gene methionine adenosyltransferase 1A Neighboring gene pulmonary surfactant-associated protein A-like Neighboring gene surfactant protein D Neighboring gene double homeobox protein B-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_024870813 Unplaced Scaffold Reference ASM1905484v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in positive regulation of phagocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in surfactant homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in multivesicular body IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in rough endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mannose-binding protein A-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Dipodomys spectabilis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1905484v1

Genomic

  1. NW_024870813.1 Reference ASM1905484v1

    Range
    6460321..6465523
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_042690325.1 → XP_042546259.1  mannose-binding protein A-like

    Conserved Domains (1) summary
    cl02432
    Location:121 → 232
    CLECT; C-type lectin (CTL)/C-type lectin-like (CTLD) domain

  2. XM_042690326.1 → XP_042546260.1  mannose-binding protein A-like

    Conserved Domains (1) summary
    cl02432
    Location:121 → 232
    CLECT; C-type lectin (CTL)/C-type lectin-like (CTLD) domain
Nucleotide Protein
Heading Accession and Version

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