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S100a11 S100 calcium binding protein A11 [ Dipodomys spectabilis (banner-tailed kangaroo rat) ]

Gene ID: 122109480, updated on 22-Mar-2024

Summary

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Gene symbol
S100a11
Gene description
S100 calcium binding protein A11
Gene type
protein coding
RefSeq status
MODEL
Organism
Dipodomys spectabilis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Castorimorpha; Heteromyidae; Dipodomyinae; Dipodomys
Orthologs
human mouse all
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Genomic context

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See S100a11 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
100 current ASM1905484v1 (GCF_019054845.1) Unplaced Scaffold NW_024870746.1 (8679833..8684714)

NW_024870746.1Genomic Context describing neighboring genes Neighboring gene trichohyalin Neighboring gene trichohyalin like 1 Neighboring gene S100 calcium binding protein A10 Neighboring gene U6 spliceosomal RNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_024870746 Unplaced Scaffold Reference ASM1905484v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium-dependent protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of cell population proliferation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein S100-A11

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Dipodomys spectabilis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1905484v1

Genomic

  1. NW_024870746.1 Reference ASM1905484v1

    Range
    8679833..8684714
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_042681911.1 → XP_042537845.1  protein S100-A11

    Conserved Domains (1) summary
    cd05023
    Location:4 → 92
    S-100A11; S-100A11 domain found in proteins similar to S100A11. S100A11 is a member of the S-100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A11 group belongs, contains only S-100 EF-hand ...

  2. XM_042681912.1 → XP_042537846.1  protein S100-A11

    Conserved Domains (1) summary
    cd05023
    Location:4 → 92
    S-100A11; S-100A11 domain found in proteins similar to S100A11. S100A11 is a member of the S-100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A11 group belongs, contains only S-100 EF-hand ...
Nucleotide Protein
Heading Accession and Version

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