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LOC122093489 starch synthase 3, chloroplastic/amyloplastic-like [ Macadamia integrifolia ]

Gene ID: 122093489, updated on 18-Sep-2024

Summary

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Gene symbol
LOC122093489
Gene description
starch synthase 3, chloroplastic/amyloplastic-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Macadamia integrifolia
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Proteales; Proteaceae; Macadamia
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Genomic context

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See LOC122093489 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
16
Annotation release Status Assembly Chr Location
100 current SCU_Mint_v3 (GCF_013358625.1) 11 NC_056567.1 (30280489..30299902)

Chromosome 11 - NC_056567.1Genomic Context describing neighboring genes Neighboring gene protein RRP6-like 3 Neighboring gene triacylglycerol lipase SDP1-like Neighboring gene uncharacterized LOC122093529 Neighboring gene heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_056567.1 Chromosome 11 Reference SCU_Mint_v3 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,4-glucan glucosyltransferase (UDP-glucose donor) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables starch binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
starch synthase 3, chloroplastic/amyloplastic-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macadamia integrifolia Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference SCU_Mint_v3 Primary Assembly

Genomic

  1. NC_056567.1 Reference SCU_Mint_v3 Primary Assembly

    Range
    30280489..30299902
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_042663834.1 → XP_042519768.1  starch synthase 3, chloroplastic/amyloplastic-like

    Conserved Domains (1) summary
    PLN02316
    Location:205 → 1219
    PLN02316; synthase/transferase
Nucleotide Protein
Heading Accession and Version

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