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LOC122088202 GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase [ Macadamia integrifolia ]

Gene ID: 122088202, updated on 18-Sep-2024

Summary

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Gene symbol
LOC122088202
Gene description
GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase
Gene type
protein coding
RefSeq status
MODEL
Organism
Macadamia integrifolia
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Proteales; Proteaceae; Macadamia
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Genomic context

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See LOC122088202 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
7
Annotation release Status Assembly Chr Location
100 current SCU_Mint_v3 (GCF_013358625.1) 9 NC_056565.1 (14142709..14152221)

Chromosome 9 - NC_056565.1Genomic Context describing neighboring genes Neighboring gene mitogen-activated protein kinase kinase kinase 18-like Neighboring gene clathrin heavy chain 1-like Neighboring gene ERBB-3 BINDING PROTEIN 1 Neighboring gene small nucleolar RNA snoR77 Neighboring gene putative disease resistance protein RGA3

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_056565.1 Chromosome 9 Reference SCU_Mint_v3 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GDP-Man:Man3GlcNAc2-PP-Dol alpha-1,2-mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macadamia integrifolia Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference SCU_Mint_v3 Primary Assembly

Genomic

  1. NC_056565.1 Reference SCU_Mint_v3 Primary Assembly

    Range
    14142709..14152221
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_042657387.1 → XP_042513321.1  GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase

    Conserved Domains (1) summary
    PLN02949
    Location:9 → 471
    PLN02949; transferase, transferring glycosyl groups
Nucleotide Protein
Heading Accession and Version

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