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LOC122078186 uncharacterized LOC122078186 [ Macadamia integrifolia ]

Gene ID: 122078186, updated on 7-Dec-2023

Summary

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Gene symbol
LOC122078186
Gene description
uncharacterized LOC122078186
Gene type
protein coding
RefSeq status
MODEL
Organism
Macadamia integrifolia
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Proteales; Proteaceae; Macadamia
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Genomic context

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See LOC122078186 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
2
Annotation release Status Assembly Chr Location
100 current SCU_Mint_v3 (GCF_013358625.1) 5 NC_056561.1 (39997958..40000855, complement)

Chromosome 5 - NC_056561.1Genomic Context describing neighboring genes Neighboring gene BTB/POZ domain-containing protein At1g67900 Neighboring gene SUPPRESSOR OF GAMMA RESPONSE 1-like Neighboring gene pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like Neighboring gene pentatricopeptide repeat-containing protein At3g48250, chloroplastic

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_056561.1 Chromosome 5 Reference SCU_Mint_v3 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in N-acetylglucosamine metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein LOC122078186

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macadamia integrifolia Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference SCU_Mint_v3 Primary Assembly

Genomic

  1. NC_056561.1 Reference SCU_Mint_v3 Primary Assembly

    Range
    39997958..40000855 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_042644068.1 → XP_042500002.1  uncharacterized protein LOC122078186

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases