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LOC122015164 mitochondrial arginine transporter BAC1-like [ Zingiber officinale ]

Gene ID: 122015164, updated on 7-Dec-2023

Summary

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Gene symbol
LOC122015164
Gene description
mitochondrial arginine transporter BAC1-like
Locus tag
ZIOFF_057164
Gene type
protein coding
RefSeq status
MODEL
Organism
Zingiber officinale
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Zingiberales; Zingiberaceae; Zingiber
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Genomic context

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See LOC122015164 in Genome Data Viewer
Location:
chromosome: 8B
Exon count:
8
Annotation release Status Assembly Chr Location
100 current Zo_v1.1 (GCF_018446385.1) 8B NC_056001.1 (857262..861682)

Chromosome 8B - NC_056001.1Genomic Context describing neighboring genes Neighboring gene ethylene-responsive transcription factor 4-like Neighboring gene putative E3 ubiquitin-protein ligase RING1a Neighboring gene auxin-repressed 12.5 kDa protein-like Neighboring gene squamosa promoter-binding protein 1-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_056001.1 Chromosome 8B Reference Zo_v1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables L-ornithine transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mitochondrial L-ornithine transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mitochondrial arginine transporter BAC1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Zingiber officinale Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Zo_v1.1 Primary Assembly

Genomic

  1. NC_056001.1 Reference Zo_v1.1 Primary Assembly

    Range
    857262..861682
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_042571914.1 → XP_042427848.1  mitochondrial arginine transporter BAC1-like isoform X2

    UniProtKB/TrEMBL
    A0A8J5F2R3
    Conserved Domains (1) summary
    PTZ00169
    Location:12 → 196
    PTZ00169; ADP/ATP transporter on adenylate translocase; Provisional

  2. XM_042571913.1 → XP_042427847.1  mitochondrial arginine transporter BAC1-like isoform X1

    UniProtKB/TrEMBL
    A0A8J5F2R3
    Conserved Domains (2) summary
    PTZ00168
    Location:112 → 295
    PTZ00168; mitochondrial carrier protein; Provisional
    PTZ00169
    Location:12 → 196
    PTZ00169; ADP/ATP transporter on adenylate translocase; Provisional
Nucleotide Protein
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