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LOC122008046 xyloglucan galactosyltransferase KATAMARI1 homolog [ Zingiber officinale ]

Gene ID: 122008046, updated on 7-Dec-2023

Summary

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Gene symbol
LOC122008046
Gene description
xyloglucan galactosyltransferase KATAMARI1 homolog
Locus tag
ZIOFF_054151
Gene type
protein coding
RefSeq status
MODEL
Organism
Zingiber officinale
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Zingiberales; Zingiberaceae; Zingiber
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Genomic context

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See LOC122008046 in Genome Data Viewer
Location:
chromosome: 8A
Exon count:
3
Annotation release Status Assembly Chr Location
100 current Zo_v1.1 (GCF_018446385.1) 8A NC_056000.1 (24846901..24849804)

Chromosome 8A - NC_056000.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC122008044 Neighboring gene oxidation resistance protein 1-like Neighboring gene WD repeat-containing protein LWD1-like Neighboring gene uncharacterized LOC122010614

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_056000.1 Chromosome 8A Reference Zo_v1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
xyloglucan galactosyltransferase KATAMARI1 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Zingiber officinale Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Zo_v1.1 Primary Assembly

Genomic

  1. NC_056000.1 Reference Zo_v1.1 Primary Assembly

    Range
    24846901..24849804
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_042563624.1 → XP_042419558.1  xyloglucan galactosyltransferase KATAMARI1 homolog isoform X1

    UniProtKB/TrEMBL
    A0A8J5FH73

  2. XM_042563623.1 → XP_042419557.1  xyloglucan galactosyltransferase KATAMARI1 homolog isoform X1

    UniProtKB/TrEMBL
    A0A8J5FH73

  3. XM_042563625.1 → XP_042419559.1  xyloglucan galactosyltransferase KATAMARI1 homolog isoform X2

Nucleotide Protein
Heading Accession and Version

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