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LOC121981583 carboxyl-terminal-processing peptidase 1, chloroplastic-like [ Zingiber officinale ]

Gene ID: 121981583, updated on 7-Dec-2023

Summary

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Gene symbol
LOC121981583
Gene description
carboxyl-terminal-processing peptidase 1, chloroplastic-like
Locus tag
ZIOFF_033485
Gene type
protein coding
RefSeq status
MODEL
Organism
Zingiber officinale
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Zingiberales; Zingiberaceae; Zingiber
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Genomic context

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See LOC121981583 in Genome Data Viewer
Location:
chromosome: 5A
Exon count:
15
Annotation release Status Assembly Chr Location
100 current Zo_v1.1 (GCF_018446385.1) 5A NC_055994.1 (124373697..124389086)

Chromosome 5A - NC_055994.1Genomic Context describing neighboring genes Neighboring gene probable L-type lectin-domain containing receptor kinase S.5 Neighboring gene uncharacterized LOC121979969 Neighboring gene uncharacterized LOC121981585 Neighboring gene uncharacterized LOC121981586 Neighboring gene scopoletin glucosyltransferase-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_055994.1 Chromosome 5A Reference Zo_v1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables endopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables serine-type peptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proteolysis IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
carboxyl-terminal-processing peptidase 1, chloroplastic-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Zingiber officinale Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Zo_v1.1 Primary Assembly

Genomic

  1. NC_055994.1 Reference Zo_v1.1 Primary Assembly

    Range
    124373697..124389086
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_042534176.1 → XP_042390110.1  carboxyl-terminal-processing peptidase 1, chloroplastic-like isoform X1

    UniProtKB/TrEMBL
    A0A8J5GX41
    Conserved Domains (1) summary
    PLN00049
    Location:116 → 464
    PLN00049; carboxyl-terminal processing protease; Provisional

  2. XM_042534175.1 → XP_042390109.1  carboxyl-terminal-processing peptidase 1, chloroplastic-like isoform X1

    UniProtKB/TrEMBL
    A0A8J5GX41
    Conserved Domains (1) summary
    PLN00049
    Location:116 → 464
    PLN00049; carboxyl-terminal processing protease; Provisional

  3. XM_042534174.1 → XP_042390108.1  carboxyl-terminal-processing peptidase 1, chloroplastic-like isoform X1

    UniProtKB/TrEMBL
    A0A8J5GX41
    Conserved Domains (1) summary
    PLN00049
    Location:116 → 464
    PLN00049; carboxyl-terminal processing protease; Provisional

  4. XM_042534177.1 → XP_042390111.1  carboxyl-terminal-processing peptidase 1, chloroplastic-like isoform X1

    UniProtKB/TrEMBL
    A0A8J5GX41
    Conserved Domains (1) summary
    PLN00049
    Location:116 → 464
    PLN00049; carboxyl-terminal processing protease; Provisional

  5. XM_042534179.1 → XP_042390113.1  carboxyl-terminal-processing peptidase 1, chloroplastic-like isoform X2

    UniProtKB/TrEMBL
    A0A8J5GX41
    Conserved Domains (1) summary
    PLN00049
    Location:116 → 463
    PLN00049; carboxyl-terminal processing protease; Provisional

  6. XM_042534178.1 → XP_042390112.1  carboxyl-terminal-processing peptidase 1, chloroplastic-like isoform X2

    UniProtKB/TrEMBL
    A0A8J5GX41
    Conserved Domains (1) summary
    PLN00049
    Location:116 → 463
    PLN00049; carboxyl-terminal processing protease; Provisional
Nucleotide Protein
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