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tab2 TGF-beta activated kinase 1 (MAP3K7) binding protein 2 [ Plectropomus leopardus (leopard coralgrouper) ]

Gene ID: 121955308, updated on 22-Mar-2024

Summary

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Gene symbol
tab2
Gene description
TGF-beta activated kinase 1 (MAP3K7) binding protein 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Plectropomus leopardus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Serranoidei; Serranidae; Epinephelinae; Epinephelini; Plectropomus
Orthologs
human zebrafish all
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Genomic context

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See tab2 in Genome Data Viewer
Location:
chromosome: 16
Exon count:
8
Annotation release Status Assembly Chr Location
100 current YSFRI_Pleo_2.0 (GCF_008729295.1) 16 NC_056478.1 (26728247..26781166, complement)

Chromosome 16 - NC_056478.1Genomic Context describing neighboring genes Neighboring gene peptidylprolyl isomerase (cyclophilin)-like 4 Neighboring gene probable ribonuclease ZC3H12D Neighboring gene cyclin-dependent kinase 19 Neighboring gene adenosylmethionine decarboxylase 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_056478.1 Chromosome 16 Reference YSFRI_Pleo_2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables K63-linked polyubiquitin modification-dependent protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of protein kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
TGF-beta-activated kinase 1 and MAP3K7-binding protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Plectropomus leopardus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference YSFRI_Pleo_2.0 Primary Assembly

Genomic

  1. NC_056478.1 Reference YSFRI_Pleo_2.0 Primary Assembly

    Range
    26728247..26781166 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_042503193.1 → XP_042359127.1  TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 isoform X1

    Conserved Domains (4) summary
    smart00547
    Location:762 → 785
    ZnF_RBZ; Zinc finger domain
    PHA03247
    Location:396 → 584
    PHA03247; large tegument protein UL36; Provisional
    cd14362
    Location:9 → 50
    CUE_TAB2_TAB3; CUE domain found in the N-terminal of TGF-beta-activated kinase 1 and MAP3K7-binding proteins TAB2, TAB3 and similar proteins
    sd00029
    Location:763 → 782
    zf-RanBP2; RanBP2-type Zn finger [structural motif]

  2. XM_042503195.1 → XP_042359129.1  TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 isoform X3

    Conserved Domains (4) summary
    smart00547
    Location:730 → 753
    ZnF_RBZ; Zinc finger domain
    PHA03247
    Location:396 → 584
    PHA03247; large tegument protein UL36; Provisional
    cd14362
    Location:9 → 50
    CUE_TAB2_TAB3; CUE domain found in the N-terminal of TGF-beta-activated kinase 1 and MAP3K7-binding proteins TAB2, TAB3 and similar proteins
    sd00029
    Location:731 → 750
    zf-RanBP2; RanBP2-type Zn finger [structural motif]

  3. XM_042503194.1 → XP_042359128.1  TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 isoform X2

    Conserved Domains (4) summary
    smart00547
    Location:735 → 758
    ZnF_RBZ; Zinc finger domain
    PHA03247
    Location:396 → 584
    PHA03247; large tegument protein UL36; Provisional
    cd14362
    Location:9 → 50
    CUE_TAB2_TAB3; CUE domain found in the N-terminal of TGF-beta-activated kinase 1 and MAP3K7-binding proteins TAB2, TAB3 and similar proteins
    sd00029
    Location:736 → 755
    zf-RanBP2; RanBP2-type Zn finger [structural motif]

  4. XM_042503192.1 → XP_042359126.1  TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 isoform X1

    Conserved Domains (4) summary
    smart00547
    Location:762 → 785
    ZnF_RBZ; Zinc finger domain
    PHA03247
    Location:396 → 584
    PHA03247; large tegument protein UL36; Provisional
    cd14362
    Location:9 → 50
    CUE_TAB2_TAB3; CUE domain found in the N-terminal of TGF-beta-activated kinase 1 and MAP3K7-binding proteins TAB2, TAB3 and similar proteins
    sd00029
    Location:763 → 782
    zf-RanBP2; RanBP2-type Zn finger [structural motif]
Nucleotide Protein
Heading Accession and Version

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