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ano5a anoctamin 5a [ Plectropomus leopardus (leopard coralgrouper) ]

Gene ID: 121949674, updated on 22-Mar-2024

Summary

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Gene symbol
ano5a
Gene description
anoctamin 5a
Gene type
protein coding
RefSeq status
MODEL
Organism
Plectropomus leopardus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Serranoidei; Serranidae; Epinephelinae; Epinephelini; Plectropomus
Orthologs
human zebrafish all
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Genomic context

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See ano5a in Genome Data Viewer
Location:
chromosome: 11
Exon count:
24
Annotation release Status Assembly Chr Location
100 current YSFRI_Pleo_2.0 (GCF_008729295.1) 11 NC_056473.1 (6641918..6666023)

Chromosome 11 - NC_056473.1Genomic Context describing neighboring genes Neighboring gene plakophilin-3-like Neighboring gene single Ig IL-1-related receptor-like Neighboring gene anoctamin-9 Neighboring gene P2Y purinoceptor 3-like Neighboring gene vesicular glutamate transporter 2.1-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_056473.1 Chromosome 11 Reference YSFRI_Pleo_2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables chloride channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein dimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chloride transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
anoctamin-5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Plectropomus leopardus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference YSFRI_Pleo_2.0 Primary Assembly

Genomic

  1. NC_056473.1 Reference YSFRI_Pleo_2.0 Primary Assembly

    Range
    6641918..6666023
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_042495391.1 → XP_042351325.1  anoctamin-5 isoform X1

  2. XM_042495392.1 → XP_042351326.1  anoctamin-5 isoform X2

  3. XM_042495393.1 → XP_042351327.1  anoctamin-5 isoform X3

  4. XM_042495394.1 → XP_042351328.1  anoctamin-5 isoform X4

  5. XM_042495395.1 → XP_042351329.1  anoctamin-5 isoform X5

Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases