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zbtb44 zinc finger and BTB domain containing 44 [ Plectropomus leopardus (leopard coralgrouper) ]

Gene ID: 121943003, updated on 22-Mar-2024

Summary

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Gene symbol
zbtb44
Gene description
zinc finger and BTB domain containing 44
Gene type
protein coding
RefSeq status
MODEL
Organism
Plectropomus leopardus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Serranoidei; Serranidae; Epinephelinae; Epinephelini; Plectropomus
Orthologs
human zebrafish all
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Genomic context

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See zbtb44 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
6
Annotation release Status Assembly Chr Location
100 current YSFRI_Pleo_2.0 (GCF_008729295.1) 5 NC_056467.1 (2580476..2600985)

Chromosome 5 - NC_056467.1Genomic Context describing neighboring genes Neighboring gene A disintegrin and metalloproteinase with thrombospondin motifs 15-like Neighboring gene A disintegrin and metalloproteinase with thrombospondin motifs 8-like Neighboring gene uncharacterized protein C11orf53 homolog Neighboring gene lnc RNA pou2af1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_056467.1 Chromosome 5 Reference YSFRI_Pleo_2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger and BTB domain-containing protein 44

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Plectropomus leopardus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference YSFRI_Pleo_2.0 Primary Assembly

Genomic

  1. NC_056467.1 Reference YSFRI_Pleo_2.0 Primary Assembly

    Range
    2580476..2600985
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_042486350.1 → XP_042342284.1  zinc finger and BTB domain-containing protein 44

    Conserved Domains (5) summary
    COG5048
    Location:397 → 461
    COG5048; FOG: Zn-finger [General function prediction only]
    COG5189
    Location:311 → 461
    SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
    sd00017
    Location:413 → 433
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00020
    Location:501 → 523
    ZF_C2H2; C2H2 Zn finger [structural motif]
    cd18228
    Location:12 → 130
    BTB_POZ_ZBTB44; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in zinc finger and BTB domain-containing protein 44 (ZBTB44)
Nucleotide Protein
Heading Accession and Version

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