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dpy19l3 dpy-19 like C-mannosyltransferase 3 [ Plectropomus leopardus (leopard coralgrouper) ]

Gene ID: 121941666, updated on 22-Mar-2024

Summary

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Gene symbol
dpy19l3
Gene description
dpy-19 like C-mannosyltransferase 3
Gene type
protein coding
RefSeq status
MODEL
Organism
Plectropomus leopardus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Serranoidei; Serranidae; Epinephelinae; Epinephelini; Plectropomus
Orthologs
human zebrafish all
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Genomic context

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See dpy19l3 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
21
Annotation release Status Assembly Chr Location
100 current YSFRI_Pleo_2.0 (GCF_008729295.1) 1 NC_056463.1 (36430087..36510049, complement)

Chromosome 1 - NC_056463.1Genomic Context describing neighboring genes Neighboring gene MTSS I-BAR domain containing 2b Neighboring gene neural-cadherin Neighboring gene zinc finger protein 507-like Neighboring gene zinc finger protein 507-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_056463.1 Chromosome 1 Reference YSFRI_Pleo_2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein C-linked glycosylation via 2'-alpha-mannosyl-L-tryptophan IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nuclear inner membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable C-mannosyltransferase DPY19L3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Plectropomus leopardus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference YSFRI_Pleo_2.0 Primary Assembly

Genomic

  1. NC_056463.1 Reference YSFRI_Pleo_2.0 Primary Assembly

    Range
    36430087..36510049 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_042484505.1 → XP_042340439.1  probable C-mannosyltransferase DPY19L3 isoform X2

  2. XM_042484517.1 → XP_042340451.1  probable C-mannosyltransferase DPY19L3 isoform X4

  3. XM_042484496.1 → XP_042340430.1  probable C-mannosyltransferase DPY19L3 isoform X1

  4. XM_042484511.1 → XP_042340445.1  probable C-mannosyltransferase DPY19L3 isoform X3

Nucleotide Protein
Heading Accession and Version

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