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SCD5 stearoyl-CoA desaturase 5 [ Sceloporus undulatus (fence lizard) ]

Gene ID: 121931874, updated on 22-Mar-2024

Summary

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Gene symbol
SCD5
Gene description
stearoyl-CoA desaturase 5
Gene type
protein coding
RefSeq status
MODEL
Organism
Sceloporus undulatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Iguania; Phrynosomatidae; Phrynosomatinae; Sceloporus
Orthologs
human mouse all
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Genomic context

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See SCD5 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
5
Annotation release Status Assembly Chr Location
100 current SceUnd_v1.1 (GCF_019175285.1) 5 NC_056526.1 (180300961..180349105)

Chromosome 5 - NC_056526.1Genomic Context describing neighboring genes Neighboring gene general transcription factor II-I repeat domain-containing protein 2A-like Neighboring gene SEC31 homolog A, COPII coat complex component Neighboring gene transmembrane protein 150C Neighboring gene uncharacterized LOC121931612 Neighboring gene enolase-phosphatase 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_056526.1 Chromosome 5 Reference SceUnd_v1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in lipid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
stearoyl-CoA desaturase 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sceloporus undulatus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference SceUnd_v1.1

Genomic

  1. NC_056526.1 Reference SceUnd_v1.1

    Range
    180300961..180349105
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_042469985.1 → XP_042325919.1  stearoyl-CoA desaturase 5

    Conserved Domains (1) summary
    cd03505
    Location:69 → 309
    Delta9-FADS-like; The Delta9 Fatty Acid Desaturase (Delta9-FADS)-like CD includes the delta-9 and delta-11 acyl CoA desaturases found in various eukaryotes including vertebrates, insects, higher plants, and fungi. The delta-9 acyl-lipid desaturases are found in a wide ...
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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