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CH25H cholesterol 25-hydroxylase [ Sceloporus undulatus (fence lizard) ]

Gene ID: 121926373, updated on 22-Mar-2024

Summary

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Gene symbol
CH25H
Gene description
cholesterol 25-hydroxylase
Gene type
protein coding
RefSeq status
MODEL
Organism
Sceloporus undulatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Iguania; Phrynosomatidae; Phrynosomatinae; Sceloporus
Orthologs
human mouse all
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Genomic context

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See CH25H in Genome Data Viewer
Location:
chromosome: 3
Exon count:
1
Annotation release Status Assembly Chr Location
100 current SceUnd_v1.1 (GCF_019175285.1) 3 NC_056524.1 (178862110..178863456, complement)

Chromosome 3 - NC_056524.1Genomic Context describing neighboring genes Neighboring gene STAM binding protein like 1 Neighboring gene actin alpha 2, smooth muscle Neighboring gene Fas cell surface death receptor Neighboring gene putative lysosomal acid lipase/cholesteryl ester hydrolase Neighboring gene interferon-induced protein with tetratricopeptide repeats 5-like Neighboring gene interferon-induced protein with tetratricopeptide repeats 5-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_056524.1 Chromosome 3 Reference SceUnd_v1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables C-4 methylsterol oxidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables iron ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables steroid hydroxylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cholesterol metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sterol biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cholesterol 25-hydroxylase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sceloporus undulatus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference SceUnd_v1.1

Genomic

  1. NC_056524.1 Reference SceUnd_v1.1

    Range
    178862110..178863456 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_042459310.1 → XP_042315244.1  cholesterol 25-hydroxylase

    Conserved Domains (1) summary
    COG3000
    Location:148 → 270
    ERG3; Sterol desaturase/sphingolipid hydroxylase, fatty acid hydroxylase superfamily [Lipid transport and metabolism]
Nucleotide Protein
Heading Accession and Version

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